Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 Y_RNA.234-201ENST00000364409 97 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 RNA5SP37-201ENST00000365420 130 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.47□□□□□ -2.01
CKAP4Q07065 MIR493-201ENST00000385254 89 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 SNORD115.1-201ENST00000391109 76 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 TMEM167AP1-201ENST00000423409 219 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.47□□□□□ -2.01
CKAP4Q07065 WARS2P1-201ENST00000429678 537 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 DLGAP5P1-201ENST00000430307 464 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.47□□□□□ -2.01
CKAP4Q07065 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.47□□□□□ -2.01
CKAP4Q07065 RPL7P36-201ENST00000444633 681 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.47□□□□□ -2.01
CKAP4Q07065 SSXP1-201ENST00000453640 473 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 BX510359.1-201ENST00000456973 237 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 AC023424.2-201ENST00000493479 777 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 AC034222.1-201ENST00000494052 532 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 COX7A2P2-201ENST00000505291 250 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.47□□□□□ -2.01
CKAP4Q07065 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
CKAP4Q07065 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.47□□□□□ -2.01
CKAP4Q07065 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.47□□□□□ -2.01
CKAP4Q07065 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.47□□□□□ -2.01
CKAP4Q07065 AC116347.2-201ENST00000514912 523 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 RNU6-714P-201ENST00000516963 103 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 RN7SKP40-201ENST00000517211 242 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.47□□□□□ -2.01
CKAP4Q07065 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.47□□□□□ -2.01
CKAP4Q07065 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.47□□□□□ -2.01
CKAP4Q07065 AP002748.2-201ENST00000528671 348 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 AP000867.2-201ENST00000532468 320 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.47□□□□□ -2.01
CKAP4Q07065 SETP7-201ENST00000552169 453 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.47□□□□□ -2.01
CKAP4Q07065 AC103810.1-201ENST00000579873 453 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.47□□□□□ -2.01
CKAP4Q07065 AC068790.2-201ENST00000602601 557 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 AC103591.3-201ENST00000608684 209 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 AC010678.1-201ENST00000614118 713 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 AC040168.1-201ENST00000623594 991 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 AC098679.4-201ENST00000624241 654 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 AC110079.1-202ENST00000635213 138 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
CKAP4Q07065 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.47□□□□□ -2.01
CKAP4Q07065 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.01
CKAP4Q07065 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.46□□□□□ -2.02
CKAP4Q07065 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CKAP4Q07065 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.46□□□□□ -2.02
CKAP4Q07065 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 RNU4-75P-201ENST00000364621 146 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 RNU6-1119P-201ENST00000384349 108 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 Y_RNA.548-201ENST00000384656 105 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 MIR627-201ENST00000384979 97 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 MIR34B-201ENST00000385076 84 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 DEFB108C-201ENST00000400154 252 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 AC092447.6-201ENST00000414578 210 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 AL356583.2-201ENST00000426536 280 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CKAP4Q07065 FCF1P1-201ENST00000432690 571 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.46□□□□□ -2.02
CKAP4Q07065 AL031667.1-201ENST00000440222 725 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.46□□□□□ -2.02
CKAP4Q07065 FAM103A2P-201ENST00000444122 354 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.46□□□□□ -2.02
CKAP4Q07065 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.46□□□□□ -2.02
CKAP4Q07065 SNRPGP6-201ENST00000451124 220 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 SNORD42A-201ENST00000459584 64 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.46□□□□□ -2.02
CKAP4Q07065 ARL2BPP4-201ENST00000506854 471 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.46□□□□□ -2.02
CKAP4Q07065 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.46□□□□□ -2.02
CKAP4Q07065 AC006445.2-201ENST00000510061 472 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.46□□□□□ -2.02
CKAP4Q07065 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.46□□□□□ -2.02
CKAP4Q07065 RNA5SP367-201ENST00000516557 118 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 RPPH1-2P-201ENST00000516688 293 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 AP003497.1-201ENST00000528472 562 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 AC022878.1-201ENST00000530684 149 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.46□□□□□ -2.02
CKAP4Q07065 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.46□□□□□ -2.02
CKAP4Q07065 AGGF1P4-201ENST00000568249 801 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 AC012213.3-201ENST00000577199 777 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 FAM60BP-201ENST00000578364 658 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.46□□□□□ -2.02
CKAP4Q07065 MIR3611-201ENST00000584484 83 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 AC005771.1-201ENST00000585581 349 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.46□□□□□ -2.02
CKAP4Q07065 AC004853.1-201ENST00000604902 698 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 MIR8057-201ENST00000620957 69 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CKAP4Q07065 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.46□□□□□ -2.02
CKAP4Q07065 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.46□□□□□ -2.02
CKAP4Q07065 ZNF519P1-201ENST00000449011 1626 ntBASIC2.46□□□□□ -2.02
CKAP4Q07065 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.45□□□□□ -2.02
CKAP4Q07065 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CKAP4Q07065 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
CKAP4Q07065 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CKAP4Q07065 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms