Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RNU6ATAC-201ENST00000408749 126 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 RNU6-1025P-201ENST00000410629 104 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 RNU6-1148P-201ENST00000410992 104 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 NDUFB4P5-201ENST00000415445 361 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 RPLP0P7-201ENST00000416050 667 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 PDCL2P1-201ENST00000419302 352 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.72□□□□□ -1.81
NKX6-1P78426 UBE2D3P2-201ENST00000424409 445 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 AL157831.1-201ENST00000426134 473 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.72□□□□□ -1.81
NKX6-1P78426 RPL35AP15-201ENST00000468042 339 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.72□□□□□ -1.81
NKX6-1P78426 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.72□□□□□ -1.81
NKX6-1P78426 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.72□□□□□ -1.81
NKX6-1P78426 AC008958.1-201ENST00000511047 682 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 RNA5SP165-201ENST00000517142 115 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 AC090136.1-201ENST00000520009 240 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 CASP1P1-201ENST00000526345 212 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 CYCSP27-201ENST00000527643 293 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.72□□□□□ -1.81
NKX6-1P78426 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
NKX6-1P78426 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.72□□□□□ -1.81
NKX6-1P78426 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.72□□□□□ -1.81
NKX6-1P78426 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.72□□□□□ -1.81
NKX6-1P78426 AC136601.2-201ENST00000604356 474 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NKX6-1P78426 RNU4-89P-201ENST00000607443 133 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 AC103710.3-201ENST00000608157 948 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 MIR6867-201ENST00000610636 67 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 AC027309.3-201ENST00000623419 351 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NKX6-1P78426 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NKX6-1P78426 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
NKX6-1P78426 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NKX6-1P78426 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.71□□□□□ -1.82
NKX6-1P78426 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.71□□□□□ -1.82
NKX6-1P78426 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NKX6-1P78426 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.71□□□□□ -1.82
NKX6-1P78426 RNA5SP22-201ENST00000365393 109 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 Y_RNA.356-201ENST00000365475 113 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 RNU6-831P-201ENST00000384548 107 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 MIR578-201ENST00000384828 96 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.71□□□□□ -1.82
NKX6-1P78426 AC108032.1-201ENST00000416706 207 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 AL356095.1-201ENST00000417217 199 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 AL353678.1-201ENST00000422735 741 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 AC073063.1-201ENST00000434352 607 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 SNRPEP9-201ENST00000436794 238 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.71□□□□□ -1.82
NKX6-1P78426 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.71□□□□□ -1.82
NKX6-1P78426 AC009901.1-201ENST00000506703 541 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 TBCAP3-201ENST00000512475 312 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 AC112206.3-201ENST00000514578 389 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 SNORA14.1-201ENST00000516113 141 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 RNA5SP49-201ENST00000516450 115 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 RNA5SP73-201ENST00000516744 108 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 IGKV2-23-201ENST00000518729 323 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.71□□□□□ -1.82
NKX6-1P78426 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.71□□□□□ -1.82
NKX6-1P78426 AC107016.1-201ENST00000550463 337 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.71□□□□□ -1.82
NKX6-1P78426 CYP4A43P-201ENST00000568156 121 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.71□□□□□ -1.82
NKX6-1P78426 AC004805.2-201ENST00000605382 482 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 CTHRC1P1-201ENST00000605383 469 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NKX6-1P78426 FAM27D1-201ENST00000612308 341 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 AC099506.2-201ENST00000623074 221 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 AC005858.4-201ENST00000623191 700 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
NKX6-1P78426 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
NKX6-1P78426 AC022336.2-201ENST00000568966 2538 ntBASIC3.71□□□□□ -1.82
NKX6-1P78426 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.7□□□□□ -1.82
NKX6-1P78426 ZNF807-201ENST00000328088 1707 ntBASIC3.7□□□□□ -1.82
NKX6-1P78426 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.7□□□□□ -1.82
NKX6-1P78426 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
NKX6-1P78426 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.7□□□□□ -1.82
NKX6-1P78426 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NKX6-1P78426 RNU1-14P-201ENST00000362759 152 ntBASIC3.7□□□□□ -1.82
NKX6-1P78426 Y_RNA.167-201ENST00000363735 109 ntBASIC3.7□□□□□ -1.82
NKX6-1P78426 AL356432.1-201ENST00000405809 419 ntBASIC3.7□□□□□ -1.82
NKX6-1P78426 MIR1911-201ENST00000410783 80 ntBASIC3.7□□□□□ -1.82
NKX6-1P78426 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.7□□□□□ -1.82
NKX6-1P78426 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.7□□□□□ -1.82
NKX6-1P78426 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.7□□□□□ -1.82
NKX6-1P78426 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.7□□□□□ -1.82
NKX6-1P78426 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.7□□□□□ -1.82
NKX6-1P78426 RPL23AP69-201ENST00000431134 458 ntBASIC3.7□□□□□ -1.82
NKX6-1P78426 HLA-N-201ENST00000437516 135 ntBASIC3.7□□□□□ -1.82
NKX6-1P78426 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.7□□□□□ -1.82
NKX6-1P78426 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.7□□□□□ -1.82
NKX6-1P78426 AL360271.2-201ENST00000447710 161 ntBASIC3.7□□□□□ -1.82
NKX6-1P78426 RPL23AP81-201ENST00000455252 467 ntBASIC3.7□□□□□ -1.82
NKX6-1P78426 RNA5SP310-201ENST00000459084 116 ntBASIC3.7□□□□□ -1.82
NKX6-1P78426 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.7□□□□□ -1.82
NKX6-1P78426 AC069113.1-201ENST00000517763 267 ntBASIC3.7□□□□□ -1.82
NKX6-1P78426 RAB11AP2-201ENST00000545905 639 ntBASIC3.7□□□□□ -1.82
NKX6-1P78426 AC026464.5-201ENST00000562497 722 ntBASIC3.7□□□□□ -1.82
NKX6-1P78426 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms