Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AP000916.1-201ENST00000533869 835 ntBASIC1.56□□□□□ -2.16
HIST1H3AP68431 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.56□□□□□ -2.16
HIST1H3AP68431 AP003973.1-201ENST00000604639 691 ntBASIC1.56□□□□□ -2.16
HIST1H3AP68431 AL138963.2-201ENST00000605137 226 ntBASIC1.56□□□□□ -2.16
HIST1H3AP68431 AC004908.2-201ENST00000609090 574 ntBASIC1.56□□□□□ -2.16
HIST1H3AP68431 AC103710.2-201ENST00000609912 942 ntBASIC1.56□□□□□ -2.16
HIST1H3AP68431 AC104820.1-201ENST00000624183 307 ntBASIC1.56□□□□□ -2.16
HIST1H3AP68431 AC007490.1-201ENST00000624321 703 ntBASIC1.56□□□□□ -2.16
HIST1H3AP68431 AP003400.5-201ENST00000624827 617 ntBASIC1.56□□□□□ -2.16
HIST1H3AP68431 AC008555.8-201ENST00000623602 2168 ntBASIC1.55□□□□□ -2.16
HIST1H3AP68431 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
HIST1H3AP68431 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HIST1H3AP68431 RNU5E-8P-201ENST00000363502 116 ntBASIC1.55□□□□□ -2.16
HIST1H3AP68431 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.55□□□□□ -2.16
HIST1H3AP68431 AL356432.1-201ENST00000405809 419 ntBASIC1.55□□□□□ -2.16
HIST1H3AP68431 TAF13P2-201ENST00000416876 286 ntBASIC1.55□□□□□ -2.16
HIST1H3AP68431 CR848007.2-201ENST00000424918 787 ntBASIC1.55□□□□□ -2.16
HIST1H3AP68431 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.55□□□□□ -2.16
HIST1H3AP68431 RPL23AP6-201ENST00000446637 472 ntBASIC1.55□□□□□ -2.16
HIST1H3AP68431 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.55□□□□□ -2.16
HIST1H3AP68431 RPS20P22-201ENST00000473700 357 ntBASIC1.55□□□□□ -2.16
HIST1H3AP68431 TRBV1-201ENST00000476502 284 ntBASIC1.55□□□□□ -2.16
HIST1H3AP68431 AC068587.2-201ENST00000478386 781 ntBASIC1.55□□□□□ -2.16
HIST1H3AP68431 BOLA3P3-201ENST00000505182 232 ntBASIC1.55□□□□□ -2.16
HIST1H3AP68431 MTND4P2-201ENST00000507767 1203 ntBASIC1.55□□□□□ -2.16
HIST1H3AP68431 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.55□□□□□ -2.16
HIST1H3AP68431 RANP3-201ENST00000530970 276 ntBASIC1.55□□□□□ -2.16
HIST1H3AP68431 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.55□□□□□ -2.16
HIST1H3AP68431 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.55□□□□□ -2.16
HIST1H3AP68431 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.55□□□□□ -2.16
HIST1H3AP68431 AC002545.1-201ENST00000592511 181 ntBASIC1.55□□□□□ -2.16
HIST1H3AP68431 AC243960.4-201ENST00000600532 288 ntBASIC1.55□□□□□ -2.16
HIST1H3AP68431 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.55□□□□□ -2.16
HIST1H3AP68431 AL158211.4-201ENST00000606988 584 ntBASIC1.55□□□□□ -2.16
HIST1H3AP68431 AC007038.2-201ENST00000608095 740 ntBASIC1.55□□□□□ -2.16
HIST1H3AP68431 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.55□□□□□ -2.16
HIST1H3AP68431 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
HIST1H3AP68431 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.55□□□□□ -2.16
HIST1H3AP68431 OR1S1-201ENST00000624470 978 ntBASIC1.55□□□□□ -2.16
HIST1H3AP68431 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.55□□□□□ -2.16
HIST1H3AP68431 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
HIST1H3AP68431 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.54□□□□□ -2.16
HIST1H3AP68431 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.54□□□□□ -2.16
HIST1H3AP68431 RNU6-1066P-201ENST00000363573 105 ntBASIC1.54□□□□□ -2.16
HIST1H3AP68431 U8.13-201ENST00000390842 128 ntBASIC1.54□□□□□ -2.16
HIST1H3AP68431 RNU6-1140P-201ENST00000410517 106 ntBASIC1.54□□□□□ -2.16
HIST1H3AP68431 RNU2-63P-201ENST00000410792 194 ntBASIC1.54□□□□□ -2.16
HIST1H3AP68431 RNU6-575P-201ENST00000411326 105 ntBASIC1.54□□□□□ -2.16
HIST1H3AP68431 AL592310.1-201ENST00000414330 671 ntBASIC1.54□□□□□ -2.16
HIST1H3AP68431 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.54□□□□□ -2.16
HIST1H3AP68431 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.54□□□□□ -2.16
HIST1H3AP68431 GTF2IP7-202ENST00000436677 309 ntBASIC1.54□□□□□ -2.16
HIST1H3AP68431 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.54□□□□□ -2.16
HIST1H3AP68431 AC098831.1-201ENST00000440661 216 ntBASIC1.54□□□□□ -2.16
HIST1H3AP68431 RPL32P28-201ENST00000443577 397 ntBASIC1.54□□□□□ -2.16
HIST1H3AP68431 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.54□□□□□ -2.16
HIST1H3AP68431 OFD1P3Y-201ENST00000453312 783 ntBASIC1.54□□□□□ -2.16
HIST1H3AP68431 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.54□□□□□ -2.16
HIST1H3AP68431 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HIST1H3AP68431 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.54□□□□□ -2.16
HIST1H3AP68431 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.54□□□□□ -2.16
HIST1H3AP68431 SNORA31.23-201ENST00000517219 133 ntBASIC1.54□□□□□ -2.16
HIST1H3AP68431 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.54□□□□□ -2.16
HIST1H3AP68431 ADAM3B-201ENST00000569937 840 ntBASIC1.54□□□□□ -2.16
HIST1H3AP68431 AC024614.2-201ENST00000577584 372 ntBASIC1.54□□□□□ -2.16
HIST1H3AP68431 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.54□□□□□ -2.16
HIST1H3AP68431 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HIST1H3AP68431 AC011451.2-201ENST00000604303 598 ntBASIC1.54□□□□□ -2.16
HIST1H3AP68431 AC016911.1-201ENST00000613297 452 ntBASIC1.54□□□□□ -2.16
HIST1H3AP68431 AC013476.2-201ENST00000614456 459 ntBASIC1.54□□□□□ -2.16
HIST1H3AP68431 MIR4275-201ENST00000636486 87 ntBASIC1.54□□□□□ -2.16
HIST1H3AP68431 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
HIST1H3AP68431 RNU6-486P-201ENST00000363116 107 ntBASIC1.53□□□□□ -2.16
HIST1H3AP68431 RNU6-353P-201ENST00000364266 108 ntBASIC1.53□□□□□ -2.16
HIST1H3AP68431 U3.13-201ENST00000364804 214 ntBASIC1.53□□□□□ -2.16
HIST1H3AP68431 RNU6-883P-201ENST00000384597 107 ntBASIC1.53□□□□□ -2.16
HIST1H3AP68431 MIR23A-201ENST00000385245 73 ntBASIC1.53□□□□□ -2.16
HIST1H3AP68431 MIR147B-201ENST00000390185 80 ntBASIC1.53□□□□□ -2.16
HIST1H3AP68431 SNRPEP2-201ENST00000397592 279 ntBASIC1.53□□□□□ -2.16
HIST1H3AP68431 RPS20P15-201ENST00000412792 311 ntBASIC1.53□□□□□ -2.16
HIST1H3AP68431 SNORD56-201ENST00000413522 71 ntBASIC1.53□□□□□ -2.16
HIST1H3AP68431 ZYG11AP1-201ENST00000430329 837 ntBASIC1.53□□□□□ -2.16
HIST1H3AP68431 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.53□□□□□ -2.16
HIST1H3AP68431 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.53□□□□□ -2.16
HIST1H3AP68431 AC026410.2-201ENST00000460281 156 ntBASIC1.53□□□□□ -2.16
HIST1H3AP68431 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.53□□□□□ -2.16
HIST1H3AP68431 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.53□□□□□ -2.16
HIST1H3AP68431 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.53□□□□□ -2.16
HIST1H3AP68431 AC107953.1-201ENST00000522216 297 ntBASIC1.53□□□□□ -2.16
HIST1H3AP68431 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
HIST1H3AP68431 AP005639.2-201ENST00000527592 928 ntBASIC1.53□□□□□ -2.16
HIST1H3AP68431 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.53□□□□□ -2.16
HIST1H3AP68431 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HIST1H3AP68431 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.53□□□□□ -2.16
HIST1H3AP68431 MIR4255-201ENST00000579351 72 ntBASIC1.53□□□□□ -2.16
HIST1H3AP68431 MIR3618-201ENST00000580330 88 ntBASIC1.53□□□□□ -2.16
HIST1H3AP68431 AL121652.1-201ENST00000608851 448 ntBASIC1.53□□□□□ -2.16
HIST1H3AP68431 AC022202.1-201ENST00000613515 211 ntBASIC1.53□□□□□ -2.16
HIST1H3AP68431 AL359854.1-201ENST00000614203 1594 ntBASIC1.53□□□□□ -2.16
HIST1H3AP68431 AC012150.2-201ENST00000621300 544 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms