Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.24□□□□□ -2.37
RPL39P62891 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.24□□□□□ -2.37
RPL39P62891 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
RPL39P62891 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC0.23□□□□□ -2.37
RPL39P62891 AC123912.3-201ENST00000600907 1367 ntBASIC0.23□□□□□ -2.37
RPL39P62891 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
RPL39P62891 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
RPL39P62891 RNA5SP347-201ENST00000362445 119 ntBASIC0.23□□□□□ -2.37
RPL39P62891 SNORD18A-201ENST00000363753 72 ntBASIC0.23□□□□□ -2.37
RPL39P62891 MIR520E-201ENST00000384867 87 ntBASIC0.23□□□□□ -2.37
RPL39P62891 MIR30A-201ENST00000385092 71 ntBASIC0.23□□□□□ -2.37
RPL39P62891 MIR23A-201ENST00000385245 73 ntBASIC0.23□□□□□ -2.37
RPL39P62891 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
RPL39P62891 RNA5SP212-201ENST00000391223 107 ntBASIC0.23□□□□□ -2.37
RPL39P62891 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
RPL39P62891 RNU2-64P-201ENST00000411315 191 ntBASIC0.23□□□□□ -2.37
RPL39P62891 AP000275.1-201ENST00000411943 390 ntBASIC0.23□□□□□ -2.37
RPL39P62891 NUP35P2-201ENST00000416748 943 ntBASIC0.23□□□□□ -2.37
RPL39P62891 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.23□□□□□ -2.37
RPL39P62891 AC093106.2-201ENST00000428212 385 ntBASIC0.23□□□□□ -2.37
RPL39P62891 AC092628.1-201ENST00000436250 252 ntBASIC0.23□□□□□ -2.37
RPL39P62891 SNRPGP6-201ENST00000451124 220 ntBASIC0.23□□□□□ -2.37
RPL39P62891 MRPL35P4-201ENST00000453682 566 ntBASIC0.23□□□□□ -2.37
RPL39P62891 AC145146.1-201ENST00000496370 254 ntBASIC0.23□□□□□ -2.37
RPL39P62891 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
RPL39P62891 AC108078.2-201ENST00000510750 236 ntBASIC0.23□□□□□ -2.37
RPL39P62891 ACA64.5-201ENST00000516207 127 ntBASIC0.23□□□□□ -2.37
RPL39P62891 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.23□□□□□ -2.37
RPL39P62891 AP004371.1-201ENST00000525240 214 ntBASIC0.23□□□□□ -2.37
RPL39P62891 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.23□□□□□ -2.37
RPL39P62891 AP000889.1-201ENST00000530968 660 ntBASIC0.23□□□□□ -2.37
RPL39P62891 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.23□□□□□ -2.37
RPL39P62891 AC068135.2-201ENST00000569293 1028 ntBASIC0.23□□□□□ -2.37
RPL39P62891 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC0.23□□□□□ -2.37
RPL39P62891 NSRP1P1-201ENST00000444067 1693 ntBASIC0.22□□□□□ -2.37
RPL39P62891 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
RPL39P62891 Y_RNA.67-201ENST00000362870 100 ntBASIC0.22□□□□□ -2.37
RPL39P62891 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC0.22□□□□□ -2.37
RPL39P62891 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.22□□□□□ -2.37
RPL39P62891 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC0.22□□□□□ -2.37
RPL39P62891 AC087477.1-201ENST00000465747 340 ntBASIC0.22□□□□□ -2.37
RPL39P62891 AL133373.1-201ENST00000497098 94 ntBASIC0.22□□□□□ -2.37
RPL39P62891 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
RPL39P62891 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.22□□□□□ -2.37
RPL39P62891 RNU7-40P-201ENST00000516397 64 ntBASIC0.22□□□□□ -2.37
RPL39P62891 RNA5SP404-201ENST00000517118 132 ntBASIC0.22□□□□□ -2.37
RPL39P62891 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.22□□□□□ -2.37
RPL39P62891 DUXAP5-201ENST00000529668 529 ntBASIC0.22□□□□□ -2.37
RPL39P62891 OR8K4P-201ENST00000534608 872 ntBASIC0.22□□□□□ -2.37
RPL39P62891 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.22□□□□□ -2.37
RPL39P62891 FAM106DP-201ENST00000586416 501 ntBASIC0.22□□□□□ -2.37
RPL39P62891 AC004492.1-201ENST00000607036 742 ntBASIC0.22□□□□□ -2.37
RPL39P62891 AC103710.4-201ENST00000609301 899 ntBASIC0.22□□□□□ -2.37
RPL39P62891 AC025588.4-201ENST00000615802 908 ntBASIC0.22□□□□□ -2.37
RPL39P62891 AC011472.4-201ENST00000615848 491 ntBASIC0.22□□□□□ -2.37
RPL39P62891 AC006963.1-201ENST00000624003 1052 ntBASIC0.22□□□□□ -2.37
RPL39P62891 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
RPL39P62891 OR4G1P-203ENST00000641984 1631 ntBASIC0.21□□□□□ -2.38
RPL39P62891 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.21□□□□□ -2.38
RPL39P62891 AL139397.2-201ENST00000404529 772 ntBASIC0.21□□□□□ -2.38
RPL39P62891 RNU6-321P-201ENST00000410912 106 ntBASIC0.21□□□□□ -2.38
RPL39P62891 RN7SKP284-201ENST00000411002 343 ntBASIC0.21□□□□□ -2.38
RPL39P62891 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.21□□□□□ -2.38
RPL39P62891 CYCSP48-201ENST00000417124 323 ntBASIC0.21□□□□□ -2.38
RPL39P62891 AL358075.3-201ENST00000426289 226 ntBASIC0.21□□□□□ -2.38
RPL39P62891 AL365496.1-201ENST00000426885 215 ntBASIC0.21□□□□□ -2.38
RPL39P62891 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC0.21□□□□□ -2.38
RPL39P62891 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC0.21□□□□□ -2.38
RPL39P62891 C1DP3-201ENST00000455013 423 ntBASIC0.21□□□□□ -2.38
RPL39P62891 SYPL1P1-201ENST00000473622 768 ntBASIC0.21□□□□□ -2.38
RPL39P62891 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.21□□□□□ -2.38
RPL39P62891 SNORA31.20-201ENST00000517111 133 ntBASIC0.21□□□□□ -2.38
RPL39P62891 AC019176.1-201ENST00000518519 225 ntBASIC0.21□□□□□ -2.38
RPL39P62891 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.21□□□□□ -2.38
RPL39P62891 AC006518.2-201ENST00000542513 940 ntBASIC0.21□□□□□ -2.38
RPL39P62891 MIR4422-201ENST00000581938 83 ntBASIC0.21□□□□□ -2.38
RPL39P62891 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.21□□□□□ -2.38
RPL39P62891 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC0.21□□□□□ -2.38
RPL39P62891 XIAPP1-201ENST00000603162 600 ntBASIC0.21□□□□□ -2.38
RPL39P62891 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.21□□□□□ -2.38
RPL39P62891 AC009229.3-201ENST00000608056 282 ntBASIC0.21□□□□□ -2.38
RPL39P62891 AP003400.5-201ENST00000624827 617 ntBASIC0.21□□□□□ -2.38
RPL39P62891 AC132825.8-201ENST00000640783 297 ntBASIC0.21□□□□□ -2.38
RPL39P62891 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.2□□□□□ -2.38
RPL39P62891 MTCO1P9-201ENST00000505577 1534 ntBASIC0.2□□□□□ -2.38
RPL39P62891 RNU6-220P-201ENST00000390919 107 ntBASIC0.2□□□□□ -2.38
RPL39P62891 ARL5AP2-201ENST00000444698 533 ntBASIC0.2□□□□□ -2.38
RPL39P62891 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.2□□□□□ -2.38
RPL39P62891 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.2□□□□□ -2.38
RPL39P62891 AC006390.1-201ENST00000508068 283 ntBASIC0.2□□□□□ -2.38
RPL39P62891 AC133963.2-201ENST00000513686 578 ntBASIC0.2□□□□□ -2.38
RPL39P62891 AC136628.3-201ENST00000521868 290 ntBASIC0.2□□□□□ -2.38
RPL39P62891 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.2□□□□□ -2.38
RPL39P62891 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.2□□□□□ -2.38
RPL39P62891 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.2□□□□□ -2.38
RPL39P62891 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.2□□□□□ -2.38
RPL39P62891 MTATP6P3-201ENST00000581686 676 ntBASIC0.2□□□□□ -2.38
RPL39P62891 MIR4661-201ENST00000582720 75 ntBASIC0.2□□□□□ -2.38
RPL39P62891 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC0.2□□□□□ -2.38
RPL39P62891 AC018638.7-201ENST00000605836 1114 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms