Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 MIR3670-1-201ENST00000584160 65 ntBASIC2.73□□□□□ -1.97
SRP54P61011 MIR3670-3-201ENST00000584855 65 ntBASIC2.73□□□□□ -1.97
SRP54P61011 AC008751.2-201ENST00000597885 980 ntBASIC2.73□□□□□ -1.97
SRP54P61011 DPPA3P3-201ENST00000603842 430 ntBASIC2.73□□□□□ -1.97
SRP54P61011 AL161798.1-201ENST00000604630 131 ntBASIC2.73□□□□□ -1.97
SRP54P61011 MTND4LP5-201ENST00000605152 292 ntBASIC2.73□□□□□ -1.97
SRP54P61011 AC004805.2-201ENST00000605382 482 ntBASIC2.73□□□□□ -1.97
SRP54P61011 AC107294.1-201ENST00000609524 467 ntBASIC2.73□□□□□ -1.97
SRP54P61011 MIR3670-4-201ENST00000612260 65 ntBASIC2.73□□□□□ -1.97
SRP54P61011 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.73□□□□□ -1.97
SRP54P61011 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SRP54P61011 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SRP54P61011 AL136360.1-201ENST00000503377 1900 ntBASIC2.72□□□□□ -1.97
SRP54P61011 RNU6-1180P-201ENST00000364935 107 ntBASIC2.72□□□□□ -1.97
SRP54P61011 RNA5SP21-201ENST00000410917 96 ntBASIC2.72□□□□□ -1.97
SRP54P61011 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.72□□□□□ -1.97
SRP54P61011 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.72□□□□□ -1.97
SRP54P61011 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.72□□□□□ -1.97
SRP54P61011 RPL37P21-201ENST00000435890 276 ntBASIC2.72□□□□□ -1.97
SRP54P61011 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.72□□□□□ -1.97
SRP54P61011 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.72□□□□□ -1.97
SRP54P61011 RN7SL432P-201ENST00000484057 298 ntBASIC2.72□□□□□ -1.97
SRP54P61011 RPF2P2-201ENST00000504693 896 ntBASIC2.72□□□□□ -1.97
SRP54P61011 MRPS36P2-201ENST00000512569 299 ntBASIC2.72□□□□□ -1.97
SRP54P61011 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.72□□□□□ -1.97
SRP54P61011 SNORA31.15-201ENST00000516771 132 ntBASIC2.72□□□□□ -1.97
SRP54P61011 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.72□□□□□ -1.97
SRP54P61011 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.72□□□□□ -1.97
SRP54P61011 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.72□□□□□ -1.97
SRP54P61011 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SRP54P61011 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SRP54P61011 MRPS36P5-201ENST00000551909 298 ntBASIC2.72□□□□□ -1.97
SRP54P61011 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.72□□□□□ -1.97
SRP54P61011 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.72□□□□□ -1.97
SRP54P61011 ZNF861P-201ENST00000588126 639 ntBASIC2.72□□□□□ -1.97
SRP54P61011 AC098826.3-201ENST00000603823 466 ntBASIC2.72□□□□□ -1.97
SRP54P61011 AC008277.2-201ENST00000605196 797 ntBASIC2.72□□□□□ -1.97
SRP54P61011 AC090115.4-201ENST00000609970 188 ntBASIC2.72□□□□□ -1.97
SRP54P61011 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SRP54P61011 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.72□□□□□ -1.97
SRP54P61011 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.72□□□□□ -1.97
SRP54P61011 AC010338.1-201ENST00000621823 717 ntBASIC2.72□□□□□ -1.97
SRP54P61011 U2.21-201ENST00000637295 81 ntBASIC2.72□□□□□ -1.97
SRP54P61011 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SRP54P61011 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
SRP54P61011 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
SRP54P61011 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SRP54P61011 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SRP54P61011 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
SRP54P61011 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.71□□□□□ -1.97
SRP54P61011 MIR196B-201ENST00000384852 84 ntBASIC2.71□□□□□ -1.98
SRP54P61011 MIR627-201ENST00000384979 97 ntBASIC2.71□□□□□ -1.98
SRP54P61011 AL512633.1-201ENST00000399931 655 ntBASIC2.71□□□□□ -1.98
SRP54P61011 AL139397.2-201ENST00000404529 772 ntBASIC2.71□□□□□ -1.98
SRP54P61011 AL513475.1-201ENST00000406602 315 ntBASIC2.71□□□□□ -1.98
SRP54P61011 RPL26P27-201ENST00000414397 437 ntBASIC2.71□□□□□ -1.98
SRP54P61011 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.71□□□□□ -1.98
SRP54P61011 AL353777.1-201ENST00000425552 326 ntBASIC2.71□□□□□ -1.98
SRP54P61011 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.71□□□□□ -1.98
SRP54P61011 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.71□□□□□ -1.98
SRP54P61011 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.71□□□□□ -1.98
SRP54P61011 AL513043.1-201ENST00000439124 535 ntBASIC2.71□□□□□ -1.98
SRP54P61011 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.71□□□□□ -1.98
SRP54P61011 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.71□□□□□ -1.98
SRP54P61011 CECR9-201ENST00000453421 199 ntBASIC2.71□□□□□ -1.98
SRP54P61011 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SRP54P61011 AP000852.1-201ENST00000472460 573 ntBASIC2.71□□□□□ -1.98
SRP54P61011 RPL9P33-201ENST00000484311 566 ntBASIC2.71□□□□□ -1.98
SRP54P61011 RPS29P20-201ENST00000489592 171 ntBASIC2.71□□□□□ -1.98
SRP54P61011 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.71□□□□□ -1.98
SRP54P61011 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.71□□□□□ -1.98
SRP54P61011 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.71□□□□□ -1.98
SRP54P61011 EEF1A1P37-201ENST00000522748 715 ntBASIC2.71□□□□□ -1.98
SRP54P61011 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.71□□□□□ -1.98
SRP54P61011 GLYCAM1-201ENST00000546596 285 ntBASIC2.71□□□□□ -1.98
SRP54P61011 RPS3AP4-201ENST00000555161 764 ntBASIC2.71□□□□□ -1.98
SRP54P61011 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.71□□□□□ -1.98
SRP54P61011 MIR3146-201ENST00000580367 79 ntBASIC2.71□□□□□ -1.98
SRP54P61011 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.71□□□□□ -1.98
SRP54P61011 AC025594.3-201ENST00000613068 790 ntBASIC2.71□□□□□ -1.98
SRP54P61011 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.71□□□□□ -1.98
SRP54P61011 AC009159.1-201ENST00000618386 642 ntBASIC2.71□□□□□ -1.98
SRP54P61011 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.71□□□□□ -1.98
SRP54P61011 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SRP54P61011 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.71□□□□□ -1.98
SRP54P61011 AL355596.1-201ENST00000565399 3996 ntBASIC2.71□□□□□ -1.98
SRP54P61011 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SRP54P61011 RNU6-500P-201ENST00000362349 107 ntBASIC2.7□□□□□ -1.98
SRP54P61011 RNU6-859P-201ENST00000362728 107 ntBASIC2.7□□□□□ -1.98
SRP54P61011 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SRP54P61011 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.7□□□□□ -1.98
SRP54P61011 RPS4XP8-201ENST00000402039 771 ntBASIC2.7□□□□□ -1.98
SRP54P61011 RPS20P2-201ENST00000402520 389 ntBASIC2.7□□□□□ -1.98
SRP54P61011 AL590004.2-201ENST00000404787 371 ntBASIC2.7□□□□□ -1.98
SRP54P61011 NDUFS5P1-201ENST00000405668 289 ntBASIC2.7□□□□□ -1.98
SRP54P61011 RNU2-62P-201ENST00000410868 191 ntBASIC2.7□□□□□ -1.98
SRP54P61011 RNU2-68P-201ENST00000410878 191 ntBASIC2.7□□□□□ -1.98
SRP54P61011 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.7□□□□□ -1.98
SRP54P61011 AC023141.4-201ENST00000412031 328 ntBASIC2.7□□□□□ -1.98
SRP54P61011 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms