Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN18P56856 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
CLDN18P56856 LINC00888-204ENST00000487386 421 ntBASIC2.1□□□□□ -2.07
CLDN18P56856 AC093809.1-201ENST00000509155 340 ntBASIC2.1□□□□□ -2.07
CLDN18P56856 AC107222.1-201ENST00000510899 637 ntBASIC2.1□□□□□ -2.07
CLDN18P56856 AC093012.1-202ENST00000549403 582 ntBASIC2.1□□□□□ -2.07
CLDN18P56856 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.1□□□□□ -2.07
CLDN18P56856 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN18P56856 RPS15AP11-201ENST00000594193 385 ntBASIC2.1□□□□□ -2.07
CLDN18P56856 BNIP3P27-201ENST00000599991 412 ntBASIC2.1□□□□□ -2.07
CLDN18P56856 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.1□□□□□ -2.07
CLDN18P56856 AL391813.1-201ENST00000603098 260 ntBASIC2.1□□□□□ -2.07
CLDN18P56856 AL645944.1-201ENST00000603857 493 ntBASIC2.1□□□□□ -2.07
CLDN18P56856 AC092574.1-201ENST00000609771 420 ntBASIC2.1□□□□□ -2.07
CLDN18P56856 AC010678.1-201ENST00000614118 713 ntBASIC2.1□□□□□ -2.07
CLDN18P56856 AC025048.6-202ENST00000627667 438 ntBASIC2.1□□□□□ -2.07
CLDN18P56856 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.1□□□□□ -2.07
CLDN18P56856 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CLDN18P56856 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.09□□□□□ -2.07
CLDN18P56856 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.09□□□□□ -2.07
CLDN18P56856 MIR21-201ENST00000362134 72 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 RNU6-1167P-201ENST00000363227 94 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 RNU6-560P-201ENST00000364007 108 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 SNORD114-30-201ENST00000364448 72 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 Y_RNA.311-201ENST00000365068 96 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 RNU6-413P-201ENST00000384115 107 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 MIR147B-201ENST00000390185 80 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 MIR320C1-201ENST00000408566 88 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 RPL26P27-201ENST00000414397 437 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.09□□□□□ -2.07
CLDN18P56856 MORF4L1P6-201ENST00000418771 268 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.09□□□□□ -2.07
CLDN18P56856 BX276092.3-201ENST00000424182 230 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 SKA2P1-201ENST00000425592 390 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 Z98742.2-201ENST00000431564 187 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 GPM6BP2-201ENST00000432046 144 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 NANOGP2-201ENST00000435391 727 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 GPM6BP1-201ENST00000446387 144 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CLDN18P56856 AC005410.1-202ENST00000460347 485 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 AC010631.1-201ENST00000474150 156 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.09□□□□□ -2.07
CLDN18P56856 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.09□□□□□ -2.07
CLDN18P56856 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.09□□□□□ -2.07
CLDN18P56856 SNORA19.3-201ENST00000516165 130 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 AC009063.1-201ENST00000563342 702 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 AC009127.3-201ENST00000570531 403 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 MIR5007-201ENST00000583098 95 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 MIR4298-201ENST00000584380 73 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 AC005261.5-201ENST00000596280 355 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 AC008121.1-201ENST00000603244 268 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 AC131235.4-201ENST00000609288 620 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 PART1_2.1-201ENST00000612397 250 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.09□□□□□ -2.07
CLDN18P56856 AC012640.5-201ENST00000623897 319 ntBASIC2.09□□□□□ -2.07
CLDN18P56856 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLDN18P56856 RNU6-778P-201ENST00000363269 103 ntBASIC2.08□□□□□ -2.08
CLDN18P56856 RNA5SP125-201ENST00000364843 120 ntBASIC2.08□□□□□ -2.08
CLDN18P56856 RPL17P12-201ENST00000413391 526 ntBASIC2.08□□□□□ -2.08
CLDN18P56856 AC107081.1-201ENST00000414975 361 ntBASIC2.08□□□□□ -2.08
CLDN18P56856 AC019070.1-201ENST00000415008 1024 ntBASIC2.08□□□□□ -2.08
CLDN18P56856 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN18P56856 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.08□□□□□ -2.08
CLDN18P56856 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN18P56856 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN18P56856 ELOCP30-201ENST00000447108 299 ntBASIC2.08□□□□□ -2.08
CLDN18P56856 AC007327.1-201ENST00000447461 264 ntBASIC2.08□□□□□ -2.08
CLDN18P56856 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.08□□□□□ -2.08
CLDN18P56856 DYNLL1P5-201ENST00000467158 270 ntBASIC2.08□□□□□ -2.08
CLDN18P56856 TRBV12-1-201ENST00000479785 344 ntBASIC2.08□□□□□ -2.08
CLDN18P56856 AC109445.1-201ENST00000512356 383 ntBASIC2.08□□□□□ -2.08
CLDN18P56856 MIR892C-201ENST00000516410 77 ntBASIC2.08□□□□□ -2.08
CLDN18P56856 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.08□□□□□ -2.08
CLDN18P56856 MIR3945-201ENST00000581853 98 ntBASIC2.08□□□□□ -2.08
CLDN18P56856 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN18P56856 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.08□□□□□ -2.08
CLDN18P56856 DPPA3P3-201ENST00000603842 430 ntBASIC2.08□□□□□ -2.08
CLDN18P56856 AL133445.2-201ENST00000611191 527 ntBASIC2.08□□□□□ -2.08
CLDN18P56856 AL137847.3-201ENST00000611521 109 ntBASIC2.08□□□□□ -2.08
CLDN18P56856 AC107075.1-201ENST00000613695 314 ntBASIC2.08□□□□□ -2.08
CLDN18P56856 AC112204.3-201ENST00000623822 332 ntBASIC2.08□□□□□ -2.08
CLDN18P56856 AC079416.3-201ENST00000624479 549 ntBASIC2.08□□□□□ -2.08
CLDN18P56856 PCMTD1P7-201ENST00000634506 357 ntBASIC2.08□□□□□ -2.08
CLDN18P56856 AC116618.1-201ENST00000634617 774 ntBASIC2.08□□□□□ -2.08
CLDN18P56856 LINC02211-204ENST00000642024 1070 ntBASIC2.08□□□□□ -2.08
CLDN18P56856 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
CLDN18P56856 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.07□□□□□ -2.08
CLDN18P56856 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.07□□□□□ -2.08
CLDN18P56856 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.07□□□□□ -2.08
CLDN18P56856 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CLDN18P56856 RNU1-91P-201ENST00000364746 163 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 U8.8-201ENST00000365399 135 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 SNORA6-201ENST00000384033 151 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 RNU6-658P-201ENST00000384606 106 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 BTF3P7-201ENST00000407097 488 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 RN7SKP158-201ENST00000410453 326 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 NPM1P11-201ENST00000417106 855 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 Z98742.3-201ENST00000418637 326 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 AL353729.1-201ENST00000425044 720 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms