Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.13□□□□□ -2.07
CLDN6P56747 DUXAP3-201ENST00000603616 594 ntBASIC2.13□□□□□ -2.07
CLDN6P56747 AL357094.1-201ENST00000603845 844 ntBASIC2.13□□□□□ -2.07
CLDN6P56747 AL645944.1-201ENST00000603857 493 ntBASIC2.13□□□□□ -2.07
CLDN6P56747 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.13□□□□□ -2.07
CLDN6P56747 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLDN6P56747 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.12□□□□□ -2.07
CLDN6P56747 RNU6-432P-201ENST00000384196 109 ntBASIC2.12□□□□□ -2.07
CLDN6P56747 RNU6-754P-201ENST00000391166 107 ntBASIC2.12□□□□□ -2.07
CLDN6P56747 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.12□□□□□ -2.07
CLDN6P56747 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.12□□□□□ -2.07
CLDN6P56747 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.12□□□□□ -2.07
CLDN6P56747 USP12PX-201ENST00000432383 1057 ntBASIC2.12□□□□□ -2.07
CLDN6P56747 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.12□□□□□ -2.07
CLDN6P56747 COX7BP2-201ENST00000437976 242 ntBASIC2.12□□□□□ -2.07
CLDN6P56747 RPL7P54-201ENST00000438336 674 ntBASIC2.12□□□□□ -2.07
CLDN6P56747 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.12□□□□□ -2.07
CLDN6P56747 RPL23AP76-201ENST00000441860 458 ntBASIC2.12□□□□□ -2.07
CLDN6P56747 OSTCP8-201ENST00000445117 448 ntBASIC2.12□□□□□ -2.07
CLDN6P56747 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.12□□□□□ -2.07
CLDN6P56747 RPL23AP42-201ENST00000471152 471 ntBASIC2.12□□□□□ -2.07
CLDN6P56747 AL160314.1-201ENST00000490836 438 ntBASIC2.12□□□□□ -2.07
CLDN6P56747 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.12□□□□□ -2.07
CLDN6P56747 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.12□□□□□ -2.07
CLDN6P56747 AC022447.1-201ENST00000515358 464 ntBASIC2.12□□□□□ -2.07
CLDN6P56747 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
CLDN6P56747 DEFB131D-201ENST00000526803 184 ntBASIC2.12□□□□□ -2.07
CLDN6P56747 AL359212.1-201ENST00000556608 614 ntBASIC2.12□□□□□ -2.07
CLDN6P56747 MTND3P13-201ENST00000574391 343 ntBASIC2.12□□□□□ -2.07
CLDN6P56747 MIR4446-201ENST00000578505 67 ntBASIC2.12□□□□□ -2.07
CLDN6P56747 AF038458.1-201ENST00000588406 262 ntBASIC2.12□□□□□ -2.07
CLDN6P56747 TUG1_2.1-201ENST00000614234 87 ntBASIC2.12□□□□□ -2.07
CLDN6P56747 AC123767.1-202ENST00000620407 817 ntBASIC2.12□□□□□ -2.07
CLDN6P56747 FO624990.1-201ENST00000636373 85 ntBASIC2.12□□□□□ -2.07
CLDN6P56747 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CLDN6P56747 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CLDN6P56747 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CLDN6P56747 AL390862.1-201ENST00000635467 1469 ntBASIC2.12□□□□□ -2.07
CLDN6P56747 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CLDN6P56747 AC010329.5-201ENST00000623497 2174 ntBASIC2.12□□□□□ -2.07
CLDN6P56747 MTND4P27-201ENST00000450813 1354 ntBASIC2.11□□□□□ -2.07
CLDN6P56747 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLDN6P56747 AC004520.1-201ENST00000608362 1413 ntBASIC2.11□□□□□ -2.07
CLDN6P56747 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CLDN6P56747 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLDN6P56747 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CLDN6P56747 RNU1-138P-201ENST00000384093 164 ntBASIC2.11□□□□□ -2.07
CLDN6P56747 RNU1-52P-201ENST00000384190 164 ntBASIC2.11□□□□□ -2.07
CLDN6P56747 AL590084.2-201ENST00000401481 382 ntBASIC2.11□□□□□ -2.07
CLDN6P56747 AL591416.1-201ENST00000404015 867 ntBASIC2.11□□□□□ -2.07
CLDN6P56747 MTND1P21-201ENST00000412991 285 ntBASIC2.11□□□□□ -2.07
CLDN6P56747 UBE2FP1-201ENST00000416536 447 ntBASIC2.11□□□□□ -2.07
CLDN6P56747 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.11□□□□□ -2.07
CLDN6P56747 MED14P1-201ENST00000430517 648 ntBASIC2.11□□□□□ -2.07
CLDN6P56747 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.11□□□□□ -2.07
CLDN6P56747 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CLDN6P56747 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.11□□□□□ -2.07
CLDN6P56747 HMGB1P36-201ENST00000487709 576 ntBASIC2.11□□□□□ -2.07
CLDN6P56747 FAM92A1P2-202ENST00000504766 877 ntBASIC2.11□□□□□ -2.07
CLDN6P56747 AC008837.2-201ENST00000513076 418 ntBASIC2.11□□□□□ -2.07
CLDN6P56747 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.11□□□□□ -2.07
CLDN6P56747 RNA5SP290-201ENST00000517133 127 ntBASIC2.11□□□□□ -2.07
CLDN6P56747 AP003467.2-201ENST00000520175 319 ntBASIC2.11□□□□□ -2.07
CLDN6P56747 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.11□□□□□ -2.07
CLDN6P56747 AC135628.1-201ENST00000568867 534 ntBASIC2.11□□□□□ -2.07
CLDN6P56747 AC023043.2-201ENST00000589678 1026 ntBASIC2.11□□□□□ -2.07
CLDN6P56747 AC011494.1-201ENST00000596454 237 ntBASIC2.11□□□□□ -2.07
CLDN6P56747 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.11□□□□□ -2.07
CLDN6P56747 AP000403.1-201ENST00000603349 851 ntBASIC2.11□□□□□ -2.07
CLDN6P56747 MIR6845-201ENST00000613182 61 ntBASIC2.11□□□□□ -2.07
CLDN6P56747 AC104763.3-201ENST00000613765 618 ntBASIC2.11□□□□□ -2.07
CLDN6P56747 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CLDN6P56747 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLDN6P56747 AC092447.10-201ENST00000620607 1652 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 RNU6-744P-201ENST00000365557 107 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 RNU6-1316P-201ENST00000384242 108 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 U8.13-201ENST00000390842 128 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 RNU6-298P-201ENST00000390888 96 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 RNU6-220P-201ENST00000390919 107 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 Y_RNA.595-201ENST00000410403 105 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN6P56747 AC096649.2-201ENST00000416186 393 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 MTCYBP38-201ENST00000417160 1123 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 USP9YP13-201ENST00000417797 480 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN6P56747 HMGB1P9-201ENST00000429856 646 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 RPL35AP22-201ENST00000436855 335 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 MTCO2P25-201ENST00000447065 681 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 AL139109.1-201ENST00000455491 297 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 MEMO1P3-201ENST00000459811 302 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 AL121769.1-201ENST00000469473 401 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 AC135721.1-201ENST00000497954 479 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.1□□□□□ -2.07
CLDN6P56747 AC023141.11-201ENST00000508864 202 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.1□□□□□ -2.07
CLDN6P56747 BTF3P12-201ENST00000519620 469 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 AC021451.1-201ENST00000523498 1129 ntBASIC2.1□□□□□ -2.07
CLDN6P56747 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.1□□□□□ -2.07
CLDN6P56747 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms