Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
LBX1P52954 RNU6-348P-201ENST00000384386 107 ntBASIC3.09□□□□□ -1.91
LBX1P52954 AC004866.2-201ENST00000438285 481 ntBASIC3.09□□□□□ -1.91
LBX1P52954 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.09□□□□□ -1.91
LBX1P52954 RPS24P1-201ENST00000438550 371 ntBASIC3.09□□□□□ -1.91
LBX1P52954 RPL26P6-201ENST00000440913 438 ntBASIC3.09□□□□□ -1.91
LBX1P52954 MTND6P13-201ENST00000443510 523 ntBASIC3.09□□□□□ -1.91
LBX1P52954 RAC1P7-201ENST00000445367 377 ntBASIC3.09□□□□□ -1.91
LBX1P52954 AC011753.1-201ENST00000451001 220 ntBASIC3.09□□□□□ -1.91
LBX1P52954 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.09□□□□□ -1.91
LBX1P52954 RPL21P104-201ENST00000464143 478 ntBASIC3.09□□□□□ -1.91
LBX1P52954 RPL23AP42-201ENST00000471152 471 ntBASIC3.09□□□□□ -1.91
LBX1P52954 RPL23AP41-201ENST00000484754 458 ntBASIC3.09□□□□□ -1.91
LBX1P52954 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LBX1P52954 AC109464.2-201ENST00000510242 943 ntBASIC3.09□□□□□ -1.91
LBX1P52954 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.09□□□□□ -1.91
LBX1P52954 MTND4LP18-201ENST00000526864 291 ntBASIC3.09□□□□□ -1.91
LBX1P52954 AC123904.2-201ENST00000548059 300 ntBASIC3.09□□□□□ -1.91
LBX1P52954 AL133153.1-201ENST00000557756 303 ntBASIC3.09□□□□□ -1.91
LBX1P52954 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.09□□□□□ -1.91
LBX1P52954 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.09□□□□□ -1.91
LBX1P52954 AC005771.1-201ENST00000585581 349 ntBASIC3.09□□□□□ -1.91
LBX1P52954 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.09□□□□□ -1.91
LBX1P52954 AC131902.3-201ENST00000611767 581 ntBASIC3.09□□□□□ -1.91
LBX1P52954 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.09□□□□□ -1.91
LBX1P52954 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LBX1P52954 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
LBX1P52954 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.08□□□□□ -1.92
LBX1P52954 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LBX1P52954 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
LBX1P52954 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LBX1P52954 RNU5A-8P-201ENST00000364102 114 ntBASIC3.08□□□□□ -1.92
LBX1P52954 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
LBX1P52954 Y_RNA.598-201ENST00000410480 95 ntBASIC3.08□□□□□ -1.92
LBX1P52954 CDK8P2-201ENST00000415020 547 ntBASIC3.08□□□□□ -1.92
LBX1P52954 UBE2V1P13-201ENST00000436983 439 ntBASIC3.08□□□□□ -1.92
LBX1P52954 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.08□□□□□ -1.92
LBX1P52954 RPS12P18-201ENST00000442381 270 ntBASIC3.08□□□□□ -1.92
LBX1P52954 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.08□□□□□ -1.92
LBX1P52954 SSXP1-201ENST00000453640 473 ntBASIC3.08□□□□□ -1.92
LBX1P52954 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.08□□□□□ -1.92
LBX1P52954 TPT1P7-201ENST00000458300 517 ntBASIC3.08□□□□□ -1.92
LBX1P52954 ARL2BPP4-201ENST00000506854 471 ntBASIC3.08□□□□□ -1.92
LBX1P52954 AC091965.2-201ENST00000512324 613 ntBASIC3.08□□□□□ -1.92
LBX1P52954 AC107934.1-201ENST00000522215 217 ntBASIC3.08□□□□□ -1.92
LBX1P52954 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.08□□□□□ -1.92
LBX1P52954 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.08□□□□□ -1.92
LBX1P52954 MIR4738-201ENST00000579134 87 ntBASIC3.08□□□□□ -1.92
LBX1P52954 HMGN1P30-201ENST00000589286 268 ntBASIC3.08□□□□□ -1.92
LBX1P52954 AC119751.7-201ENST00000600494 245 ntBASIC3.08□□□□□ -1.92
LBX1P52954 AL022099.1-201ENST00000604551 712 ntBASIC3.08□□□□□ -1.92
LBX1P52954 RN7SKP299-201ENST00000606679 301 ntBASIC3.08□□□□□ -1.92
LBX1P52954 OR10AB1P-201ENST00000609613 938 ntBASIC3.08□□□□□ -1.92
LBX1P52954 AL591516.1-201ENST00000611326 274 ntBASIC3.08□□□□□ -1.92
LBX1P52954 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.08□□□□□ -1.92
LBX1P52954 AC004696.1-201ENST00000614345 607 ntBASIC3.08□□□□□ -1.92
LBX1P52954 AL355810.1-201ENST00000614629 552 ntBASIC3.08□□□□□ -1.92
LBX1P52954 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.08□□□□□ -1.92
LBX1P52954 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
LBX1P52954 AC006111.3-201ENST00000622137 383 ntBASIC3.08□□□□□ -1.92
LBX1P52954 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.08□□□□□ -1.92
LBX1P52954 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
LBX1P52954 TEX21P-201ENST00000447107 1476 ntBASIC3.08□□□□□ -1.92
LBX1P52954 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LBX1P52954 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LBX1P52954 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.07□□□□□ -1.92
LBX1P52954 RNU6-637P-201ENST00000384050 107 ntBASIC3.07□□□□□ -1.92
LBX1P52954 SNORD116-4-201ENST00000384733 96 ntBASIC3.07□□□□□ -1.92
LBX1P52954 RNA5SP213-201ENST00000391031 106 ntBASIC3.07□□□□□ -1.92
LBX1P52954 CCNG1P1-201ENST00000406783 885 ntBASIC3.07□□□□□ -1.92
LBX1P52954 MTCO2P34-201ENST00000421994 607 ntBASIC3.07□□□□□ -1.92
LBX1P52954 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.07□□□□□ -1.92
LBX1P52954 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.07□□□□□ -1.92
LBX1P52954 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.07□□□□□ -1.92
LBX1P52954 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.07□□□□□ -1.92
LBX1P52954 RPL21P66-201ENST00000426566 466 ntBASIC3.07□□□□□ -1.92
LBX1P52954 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.07□□□□□ -1.92
LBX1P52954 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.07□□□□□ -1.92
LBX1P52954 VDAC1P3-201ENST00000434069 851 ntBASIC3.07□□□□□ -1.92
LBX1P52954 AC009961.2-201ENST00000435771 251 ntBASIC3.07□□□□□ -1.92
LBX1P52954 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.07□□□□□ -1.92
LBX1P52954 AC005094.1-201ENST00000440420 368 ntBASIC3.07□□□□□ -1.92
LBX1P52954 MTND1P12-201ENST00000455231 147 ntBASIC3.07□□□□□ -1.92
LBX1P52954 HMGN2P16-201ENST00000456802 261 ntBASIC3.07□□□□□ -1.92
LBX1P52954 RNU6-956P-201ENST00000458868 103 ntBASIC3.07□□□□□ -1.92
LBX1P52954 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.07□□□□□ -1.92
LBX1P52954 RN7SL636P-201ENST00000497504 294 ntBASIC3.07□□□□□ -1.92
LBX1P52954 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.07□□□□□ -1.92
LBX1P52954 MTND4P2-201ENST00000507767 1203 ntBASIC3.07□□□□□ -1.92
LBX1P52954 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.07□□□□□ -1.92
LBX1P52954 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.07□□□□□ -1.92
LBX1P52954 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.07□□□□□ -1.92
LBX1P52954 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.07□□□□□ -1.92
LBX1P52954 RPL21P5-201ENST00000554662 472 ntBASIC3.07□□□□□ -1.92
LBX1P52954 MTCYBP33-201ENST00000575007 1130 ntBASIC3.07□□□□□ -1.92
LBX1P52954 MIR3118-1-201ENST00000581787 76 ntBASIC3.07□□□□□ -1.92
LBX1P52954 MIR4293-201ENST00000584305 78 ntBASIC3.07□□□□□ -1.92
LBX1P52954 AP001029.3-201ENST00000588063 596 ntBASIC3.07□□□□□ -1.92
LBX1P52954 BX664608.1-201ENST00000610519 487 ntBASIC3.07□□□□□ -1.92
LBX1P52954 AC011939.3-201ENST00000613686 466 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms