Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC002044.1-201ENST00000606707 158 ntBASIC4.93□□□□□ -1.62
USP11P51784 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.93□□□□□ -1.62
USP11P51784 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
USP11P51784 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.93□□□□□ -1.62
USP11P51784 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USP11P51784 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.93□□□□□ -1.62
USP11P51784 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USP11P51784 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.93□□□□□ -1.62
USP11P51784 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP11P51784 AC007529.1-201ENST00000418574 2178 ntBASIC4.92□□□□□ -1.62
USP11P51784 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.92□□□□□ -1.62
USP11P51784 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
USP11P51784 AC015813.6-201ENST00000624409 5808 ntBASIC4.92□□□□□ -1.62
USP11P51784 RNU1-132P-201ENST00000364300 164 ntBASIC4.92□□□□□ -1.62
USP11P51784 RNA5SP366-201ENST00000365454 123 ntBASIC4.92□□□□□ -1.62
USP11P51784 RNU6-1156P-201ENST00000410365 100 ntBASIC4.92□□□□□ -1.62
USP11P51784 RPL31P2-201ENST00000413849 377 ntBASIC4.92□□□□□ -1.62
USP11P51784 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.92□□□□□ -1.62
USP11P51784 PIGPP3-201ENST00000425307 415 ntBASIC4.92□□□□□ -1.62
USP11P51784 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.92□□□□□ -1.62
USP11P51784 RPS3AP12-201ENST00000443616 753 ntBASIC4.92□□□□□ -1.62
USP11P51784 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.92□□□□□ -1.62
USP11P51784 RPL23AP81-201ENST00000455252 467 ntBASIC4.92□□□□□ -1.62
USP11P51784 AC008481.1-201ENST00000463278 396 ntBASIC4.92□□□□□ -1.62
USP11P51784 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.92□□□□□ -1.62
USP11P51784 AC011005.2-201ENST00000487324 359 ntBASIC4.92□□□□□ -1.62
USP11P51784 RPL17P19-201ENST00000489069 552 ntBASIC4.92□□□□□ -1.62
USP11P51784 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.92□□□□□ -1.62
USP11P51784 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.92□□□□□ -1.62
USP11P51784 RNA5SP73-201ENST00000516744 108 ntBASIC4.92□□□□□ -1.62
USP11P51784 AP006587.4-201ENST00000526053 529 ntBASIC4.92□□□□□ -1.62
USP11P51784 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.92□□□□□ -1.62
USP11P51784 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.92□□□□□ -1.62
USP11P51784 MIR4512-201ENST00000583257 77 ntBASIC4.92□□□□□ -1.62
USP11P51784 AC012433.1-201ENST00000588916 398 ntBASIC4.92□□□□□ -1.62
USP11P51784 AC012119.1-201ENST00000603184 222 ntBASIC4.92□□□□□ -1.62
USP11P51784 SDR42E1P2-201ENST00000614861 481 ntBASIC4.92□□□□□ -1.62
USP11P51784 AC114781.5-201ENST00000615297 108 ntBASIC4.92□□□□□ -1.62
USP11P51784 SDR42E1P4-201ENST00000620894 481 ntBASIC4.92□□□□□ -1.62
USP11P51784 AC007998.5-201ENST00000622938 237 ntBASIC4.92□□□□□ -1.62
USP11P51784 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.92□□□□□ -1.62
USP11P51784 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.92□□□□□ -1.62
USP11P51784 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP11P51784 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP11P51784 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
USP11P51784 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
USP11P51784 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
USP11P51784 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.91□□□□□ -1.62
USP11P51784 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
USP11P51784 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
USP11P51784 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
USP11P51784 RNA5SP502-201ENST00000362694 119 ntBASIC4.91□□□□□ -1.62
USP11P51784 Y_RNA.48-201ENST00000362710 103 ntBASIC4.91□□□□□ -1.62
USP11P51784 Y_RNA.551-201ENST00000384661 102 ntBASIC4.91□□□□□ -1.62
USP11P51784 Y_RNA.555-201ENST00000384673 110 ntBASIC4.91□□□□□ -1.62
USP11P51784 Y_RNA.577-201ENST00000384794 101 ntBASIC4.91□□□□□ -1.62
USP11P51784 AL445529.1-201ENST00000398713 389 ntBASIC4.91□□□□□ -1.62
USP11P51784 AL138885.1-201ENST00000405921 675 ntBASIC4.91□□□□□ -1.62
USP11P51784 MIR1911-201ENST00000410783 80 ntBASIC4.91□□□□□ -1.62
USP11P51784 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.91□□□□□ -1.62
USP11P51784 UBE2V1P4-201ENST00000425374 344 ntBASIC4.91□□□□□ -1.62
USP11P51784 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.91□□□□□ -1.62
USP11P51784 AL591704.1-201ENST00000432574 275 ntBASIC4.91□□□□□ -1.62
USP11P51784 AL392103.1-201ENST00000447000 198 ntBASIC4.91□□□□□ -1.62
USP11P51784 AL162389.1-201ENST00000449233 177 ntBASIC4.91□□□□□ -1.62
USP11P51784 AL031274.1-201ENST00000450334 232 ntBASIC4.91□□□□□ -1.62
USP11P51784 AC091167.1-201ENST00000492017 396 ntBASIC4.91□□□□□ -1.62
USP11P51784 RN7SL691P-201ENST00000494487 301 ntBASIC4.91□□□□□ -1.62
USP11P51784 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.91□□□□□ -1.62
USP11P51784 HMGB1P35-201ENST00000503360 598 ntBASIC4.91□□□□□ -1.62
USP11P51784 IGKV2D-36-201ENST00000518643 226 ntBASIC4.91□□□□□ -1.62
USP11P51784 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.91□□□□□ -1.62
USP11P51784 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.91□□□□□ -1.62
USP11P51784 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.91□□□□□ -1.62
USP11P51784 AC090517.1-201ENST00000569307 266 ntBASIC4.91□□□□□ -1.62
USP11P51784 MIR3138-201ENST00000585238 82 ntBASIC4.91□□□□□ -1.62
USP11P51784 AC093227.2-201ENST00000589357 285 ntBASIC4.91□□□□□ -1.62
USP11P51784 AL031176.1-201ENST00000604554 466 ntBASIC4.91□□□□□ -1.62
USP11P51784 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
USP11P51784 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
USP11P51784 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
USP11P51784 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.9□□□□□ -1.62
USP11P51784 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.62
USP11P51784 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.9□□□□□ -1.62
USP11P51784 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
USP11P51784 Y_RNA.19-201ENST00000362462 99 ntBASIC4.9□□□□□ -1.63
USP11P51784 Y_RNA.785-201ENST00000384290 109 ntBASIC4.9□□□□□ -1.63
USP11P51784 ENSAP1-201ENST00000392855 326 ntBASIC4.9□□□□□ -1.63
USP11P51784 MTCO2P33-201ENST00000402100 465 ntBASIC4.9□□□□□ -1.63
USP11P51784 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.9□□□□□ -1.63
USP11P51784 RNU6-174P-201ENST00000410406 106 ntBASIC4.9□□□□□ -1.63
USP11P51784 RNU4-65P-201ENST00000410473 140 ntBASIC4.9□□□□□ -1.63
USP11P51784 RAC1P3-201ENST00000416129 580 ntBASIC4.9□□□□□ -1.63
USP11P51784 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.9□□□□□ -1.63
USP11P51784 AL133396.1-201ENST00000432048 687 ntBASIC4.9□□□□□ -1.63
USP11P51784 AL353997.1-201ENST00000432936 108 ntBASIC4.9□□□□□ -1.63
USP11P51784 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.9□□□□□ -1.63
USP11P51784 FCF1P4-201ENST00000448326 183 ntBASIC4.9□□□□□ -1.63
USP11P51784 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.9□□□□□ -1.63
USP11P51784 AC009963.2-201ENST00000453431 138 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms