Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.94□□□□□ -1.94
NEDD4P46934 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.94□□□□□ -1.94
NEDD4P46934 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.94□□□□□ -1.94
NEDD4P46934 AC012414.6-201ENST00000568241 401 ntBASIC2.94□□□□□ -1.94
NEDD4P46934 KC877982.1-201ENST00000602313 470 ntBASIC2.94□□□□□ -1.94
NEDD4P46934 AP000787.2-201ENST00000604432 568 ntBASIC2.94□□□□□ -1.94
NEDD4P46934 AC007621.1-201ENST00000604544 437 ntBASIC2.94□□□□□ -1.94
NEDD4P46934 AC103710.1-201ENST00000610003 901 ntBASIC2.94□□□□□ -1.94
NEDD4P46934 TUG1_2.1-201ENST00000614234 87 ntBASIC2.94□□□□□ -1.94
NEDD4P46934 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
NEDD4P46934 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NEDD4P46934 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NEDD4P46934 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.94□□□□□ -1.94
NEDD4P46934 FGF7P2-201ENST00000332473 296 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 SNORA23-201ENST00000365128 182 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.93□□□□□ -1.94
NEDD4P46934 AL162578.1-201ENST00000406202 378 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AP000567.1-201ENST00000406413 156 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 FCF1P10-201ENST00000407590 479 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 USP9YP13-201ENST00000417797 480 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AL365338.1-201ENST00000422282 858 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 MTND1P28-201ENST00000435623 950 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.93□□□□□ -1.94
NEDD4P46934 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.93□□□□□ -1.94
NEDD4P46934 snoU109.1-201ENST00000459339 135 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 HSPE1P6-201ENST00000479457 291 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.93□□□□□ -1.94
NEDD4P46934 RPS15AP36-201ENST00000492022 382 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NEDD4P46934 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.93□□□□□ -1.94
NEDD4P46934 CDC42P4-201ENST00000510507 563 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.93□□□□□ -1.94
NEDD4P46934 AC114781.4-201ENST00000513707 639 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AP003467.2-201ENST00000520175 319 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AC022616.6-201ENST00000520479 119 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.93□□□□□ -1.94
NEDD4P46934 SYF2P1-201ENST00000550658 413 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AP005205.1-201ENST00000563503 508 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 RPL23AP84-201ENST00000571193 464 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AC005951.1-201ENST00000576706 485 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 MIR3146-201ENST00000580367 79 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 MIR5092-201ENST00000583139 88 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 MIR548AB-201ENST00000584917 84 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AC005771.1-201ENST00000585581 349 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.93□□□□□ -1.94
NEDD4P46934 BNIP3P8-201ENST00000597863 560 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AC073544.2-201ENST00000601155 540 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AP001981.2-201ENST00000603241 418 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.93□□□□□ -1.94
NEDD4P46934 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NEDD4P46934 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
NEDD4P46934 AC010297.1-201ENST00000623948 149 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.93□□□□□ -1.94
NEDD4P46934 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
NEDD4P46934 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.93□□□□□ -1.94
NEDD4P46934 CUL1P1-201ENST00000509510 2425 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AC090740.1-201ENST00000623193 2262 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AC069528.2-201ENST00000624849 1991 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 RNU5A-1-201ENST00000362698 116 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.93□□□□□ -1.94
NEDD4P46934 RNU2-62P-201ENST00000410868 191 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 UBE2FP1-201ENST00000416536 447 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AC006366.1-201ENST00000422002 759 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.93□□□□□ -1.94
NEDD4P46934 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NEDD4P46934 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.93□□□□□ -1.94
NEDD4P46934 RPL17P49-201ENST00000443728 411 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 TAF9P1-201ENST00000445421 515 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 ELOCP30-201ENST00000447108 299 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 TAF9P2-201ENST00000454958 515 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NEDD4P46934 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.93□□□□□ -1.94
NEDD4P46934 CBX3P3-201ENST00000508108 532 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AC109464.2-201ENST00000510242 943 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 SNORA70.16-201ENST00000516390 95 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.93□□□□□ -1.94
NEDD4P46934 AP001804.3-201ENST00000525146 880 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 DEFB108A-201ENST00000530110 222 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AP000873.5-201ENST00000533906 236 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.93□□□□□ -1.94
NEDD4P46934 AC004486.1-201ENST00000546846 233 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AC123904.2-201ENST00000548059 300 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.93□□□□□ -1.94
NEDD4P46934 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.93□□□□□ -1.94
NEDD4P46934 AC087752.4-201ENST00000605911 462 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AC080013.6-201ENST00000606185 215 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AC239868.4-201ENST00000608318 671 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AC245517.5-201ENST00000611529 162 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AL110115.1-201ENST00000614396 364 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AC013476.2-201ENST00000614456 459 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 AL603839.4-201ENST00000624658 1005 ntBASIC2.93□□□□□ -1.94
NEDD4P46934 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.92□□□□□ -1.94
NEDD4P46934 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NEDD4P46934 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
NEDD4P46934 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.92□□□□□ -1.94
NEDD4P46934 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
NEDD4P46934 RNA5SP456-201ENST00000364002 114 ntBASIC2.92□□□□□ -1.94
NEDD4P46934 SNORA36C-201ENST00000384289 132 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms