Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 CYCSP35-201ENST00000451978 304 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 AC083798.1-201ENST00000472671 131 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 RPS20P22-201ENST00000473700 357 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.45□□□□□ -1.86
PTPN9P43378 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.45□□□□□ -1.86
PTPN9P43378 AC010265.1-201ENST00000513509 211 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.45□□□□□ -1.86
PTPN9P43378 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PTPN9P43378 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.45□□□□□ -1.86
PTPN9P43378 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.45□□□□□ -1.86
PTPN9P43378 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.45□□□□□ -1.86
PTPN9P43378 Z84480.1-201ENST00000605131 311 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 AC068944.2-201ENST00000610373 403 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 uc_338.1-201ENST00000612113 180 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 AL365204.3-201ENST00000612448 685 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.45□□□□□ -1.86
PTPN9P43378 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.45□□□□□ -1.86
PTPN9P43378 U6.105-201ENST00000637379 88 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 MIR7153-201ENST00000637758 57 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
PTPN9P43378 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PTPN9P43378 AC002546.1-201ENST00000588041 2504 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PTPN9P43378 SRP72P2-201ENST00000344851 1979 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PTPN9P43378 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.44□□□□□ -1.86
PTPN9P43378 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PTPN9P43378 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.44□□□□□ -1.86
PTPN9P43378 AC118273.1-201ENST00000525324 3006 ntBASIC3.44□□□□□ -1.86
PTPN9P43378 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTPN9P43378 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PTPN9P43378 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTPN9P43378 Y_RNA.402-201ENST00000383972 102 ntBASIC3.44□□□□□ -1.86
PTPN9P43378 Y_RNA.450-201ENST00000384198 113 ntBASIC3.44□□□□□ -1.86
PTPN9P43378 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PTPN9P43378 BX323014.1-201ENST00000412876 237 ntBASIC3.44□□□□□ -1.86
PTPN9P43378 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.44□□□□□ -1.86
PTPN9P43378 AL590383.1-201ENST00000428602 75 ntBASIC3.44□□□□□ -1.86
PTPN9P43378 AC097713.2-201ENST00000430199 356 ntBASIC3.44□□□□□ -1.86
PTPN9P43378 RPS15AP9-201ENST00000439856 381 ntBASIC3.44□□□□□ -1.86
PTPN9P43378 HMGB3P11-201ENST00000440127 604 ntBASIC3.44□□□□□ -1.86
PTPN9P43378 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PTPN9P43378 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.44□□□□□ -1.86
PTPN9P43378 HMGN1P18-201ENST00000457642 277 ntBASIC3.44□□□□□ -1.86
PTPN9P43378 RNU6-261P-201ENST00000459506 102 ntBASIC3.44□□□□□ -1.86
PTPN9P43378 AC087588.1-201ENST00000462203 316 ntBASIC3.44□□□□□ -1.86
PTPN9P43378 RPL36AP51-201ENST00000487216 318 ntBASIC3.44□□□□□ -1.86
PTPN9P43378 AC105417.1-201ENST00000514691 285 ntBASIC3.44□□□□□ -1.86
PTPN9P43378 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
PTPN9P43378 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.44□□□□□ -1.86
PTPN9P43378 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PTPN9P43378 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.44□□□□□ -1.86
PTPN9P43378 AL512360.1-201ENST00000555346 234 ntBASIC3.44□□□□□ -1.86
PTPN9P43378 AC025678.1-201ENST00000567861 338 ntBASIC3.44□□□□□ -1.86
PTPN9P43378 AC024619.4-201ENST00000580924 316 ntBASIC3.44□□□□□ -1.86
PTPN9P43378 AC007621.1-201ENST00000604544 437 ntBASIC3.44□□□□□ -1.86
PTPN9P43378 AC073657.2-201ENST00000605661 303 ntBASIC3.44□□□□□ -1.86
PTPN9P43378 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.44□□□□□ -1.86
PTPN9P43378 AC019176.2-201ENST00000611579 315 ntBASIC3.44□□□□□ -1.86
PTPN9P43378 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
PTPN9P43378 AC093648.1-201ENST00000623546 606 ntBASIC3.44□□□□□ -1.86
PTPN9P43378 AC073476.4-201ENST00000628409 72 ntBASIC3.44□□□□□ -1.86
PTPN9P43378 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.44□□□□□ -1.86
PTPN9P43378 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PTPN9P43378 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
PTPN9P43378 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PTPN9P43378 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
PTPN9P43378 OR4G2P-202ENST00000641004 1759 ntBASIC3.43□□□□□ -1.86
PTPN9P43378 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.43□□□□□ -1.86
PTPN9P43378 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PTPN9P43378 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PTPN9P43378 RNU6-179P-201ENST00000363350 107 ntBASIC3.43□□□□□ -1.86
PTPN9P43378 RNU6-946P-201ENST00000383878 107 ntBASIC3.43□□□□□ -1.86
PTPN9P43378 RNU6-701P-201ENST00000384059 107 ntBASIC3.43□□□□□ -1.86
PTPN9P43378 MIR591-201ENST00000385290 95 ntBASIC3.43□□□□□ -1.86
PTPN9P43378 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PTPN9P43378 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.43□□□□□ -1.86
PTPN9P43378 MRPL50P2-201ENST00000416821 482 ntBASIC3.43□□□□□ -1.86
PTPN9P43378 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.43□□□□□ -1.86
PTPN9P43378 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.43□□□□□ -1.86
PTPN9P43378 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.43□□□□□ -1.86
PTPN9P43378 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.43□□□□□ -1.86
PTPN9P43378 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.43□□□□□ -1.86
PTPN9P43378 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.43□□□□□ -1.86
PTPN9P43378 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.43□□□□□ -1.86
PTPN9P43378 RNU7-182P-201ENST00000459009 62 ntBASIC3.43□□□□□ -1.86
PTPN9P43378 MRPS17P3-201ENST00000465453 385 ntBASIC3.43□□□□□ -1.86
PTPN9P43378 AL049874.1-201ENST00000489560 388 ntBASIC3.43□□□□□ -1.86
PTPN9P43378 AC026427.2-201ENST00000506228 536 ntBASIC3.43□□□□□ -1.86
PTPN9P43378 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.43□□□□□ -1.86
PTPN9P43378 SNORA40.12-201ENST00000516329 111 ntBASIC3.43□□□□□ -1.86
PTPN9P43378 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.43□□□□□ -1.86
PTPN9P43378 ATP5F1P5-201ENST00000526403 760 ntBASIC3.43□□□□□ -1.86
PTPN9P43378 AC109635.3-201ENST00000529536 185 ntBASIC3.43□□□□□ -1.86
PTPN9P43378 AC004024.1-201ENST00000549244 247 ntBASIC3.43□□□□□ -1.86
PTPN9P43378 AC037471.2-201ENST00000564941 598 ntBASIC3.43□□□□□ -1.86
PTPN9P43378 SNORA59B-202ENST00000578183 701 ntBASIC3.43□□□□□ -1.86
PTPN9P43378 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.43□□□□□ -1.86
PTPN9P43378 AC104763.2-201ENST00000604179 382 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms