Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RPL21P99-201ENST00000480369 423 ntBASIC2.24□□□□□ -2.05
TNFSF9P41273 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
TNFSF9P41273 AC096571.1-202ENST00000506634 735 ntBASIC2.24□□□□□ -2.05
TNFSF9P41273 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.24□□□□□ -2.05
TNFSF9P41273 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.24□□□□□ -2.05
TNFSF9P41273 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
TNFSF9P41273 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.24□□□□□ -2.05
TNFSF9P41273 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.24□□□□□ -2.05
TNFSF9P41273 CYCSP2-201ENST00000558168 301 ntBASIC2.24□□□□□ -2.05
TNFSF9P41273 AC015712.3-201ENST00000559380 164 ntBASIC2.24□□□□□ -2.05
TNFSF9P41273 MIR4658-201ENST00000584344 65 ntBASIC2.24□□□□□ -2.05
TNFSF9P41273 AF038458.1-201ENST00000588406 262 ntBASIC2.24□□□□□ -2.05
TNFSF9P41273 BNIP3P27-201ENST00000599991 412 ntBASIC2.24□□□□□ -2.05
TNFSF9P41273 BNIP3P26-201ENST00000600827 554 ntBASIC2.24□□□□□ -2.05
TNFSF9P41273 AC021749.1-201ENST00000604322 607 ntBASIC2.24□□□□□ -2.05
TNFSF9P41273 PISRT1-201ENST00000626175 531 ntBASIC2.24□□□□□ -2.05
TNFSF9P41273 AC241585.2-209ENST00000638217 143 ntBASIC2.24□□□□□ -2.05
TNFSF9P41273 AC099063.3-201ENST00000642066 185 ntBASIC2.24□□□□□ -2.05
TNFSF9P41273 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
TNFSF9P41273 AL390862.1-201ENST00000635467 1469 ntBASIC2.24□□□□□ -2.05
TNFSF9P41273 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
TNFSF9P41273 MTND4P35-201ENST00000604257 1375 ntBASIC2.23□□□□□ -2.05
TNFSF9P41273 RN7SKP226-201ENST00000364912 300 ntBASIC2.23□□□□□ -2.05
TNFSF9P41273 RNU6-432P-201ENST00000384196 109 ntBASIC2.23□□□□□ -2.05
TNFSF9P41273 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.23□□□□□ -2.05
TNFSF9P41273 HMGN2P35-201ENST00000412164 270 ntBASIC2.23□□□□□ -2.05
TNFSF9P41273 UBE2FP1-201ENST00000416536 447 ntBASIC2.23□□□□□ -2.05
TNFSF9P41273 AL451054.2-201ENST00000420896 202 ntBASIC2.23□□□□□ -2.05
TNFSF9P41273 AL354692.1-201ENST00000423044 315 ntBASIC2.23□□□□□ -2.05
TNFSF9P41273 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.23□□□□□ -2.05
TNFSF9P41273 NANOGP2-201ENST00000435391 727 ntBASIC2.23□□□□□ -2.05
TNFSF9P41273 CR769767.1-201ENST00000436337 346 ntBASIC2.23□□□□□ -2.05
TNFSF9P41273 SDR42E1P3-201ENST00000438345 502 ntBASIC2.23□□□□□ -2.05
TNFSF9P41273 MTCO2P25-201ENST00000447065 681 ntBASIC2.23□□□□□ -2.05
TNFSF9P41273 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.23□□□□□ -2.05
TNFSF9P41273 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TNFSF9P41273 FCF1P6-201ENST00000456841 595 ntBASIC2.23□□□□□ -2.05
TNFSF9P41273 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.23□□□□□ -2.05
TNFSF9P41273 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.23□□□□□ -2.05
TNFSF9P41273 HMGB1P36-201ENST00000487709 576 ntBASIC2.23□□□□□ -2.05
TNFSF9P41273 AC108210.2-201ENST00000503681 201 ntBASIC2.23□□□□□ -2.05
TNFSF9P41273 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.23□□□□□ -2.05
TNFSF9P41273 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.23□□□□□ -2.05
TNFSF9P41273 AC021451.1-201ENST00000523498 1129 ntBASIC2.23□□□□□ -2.05
TNFSF9P41273 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.23□□□□□ -2.05
TNFSF9P41273 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.23□□□□□ -2.05
TNFSF9P41273 DEFB122-202ENST00000569013 197 ntBASIC2.23□□□□□ -2.05
TNFSF9P41273 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.23□□□□□ -2.05
TNFSF9P41273 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
TNFSF9P41273 AL356280.1-201ENST00000603614 379 ntBASIC2.23□□□□□ -2.05
TNFSF9P41273 AL357094.1-201ENST00000603845 844 ntBASIC2.23□□□□□ -2.05
TNFSF9P41273 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.23□□□□□ -2.05
TNFSF9P41273 SDR42E1P2-201ENST00000614861 481 ntBASIC2.23□□□□□ -2.05
TNFSF9P41273 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.23□□□□□ -2.05
TNFSF9P41273 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TNFSF9P41273 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
TNFSF9P41273 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
TNFSF9P41273 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.22□□□□□ -2.05
TNFSF9P41273 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.22□□□□□ -2.05
TNFSF9P41273 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.22□□□□□ -2.05
TNFSF9P41273 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
TNFSF9P41273 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TNFSF9P41273 RNA5SP393-201ENST00000363423 117 ntBASIC2.22□□□□□ -2.05
TNFSF9P41273 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
TNFSF9P41273 RNU6-754P-201ENST00000391166 107 ntBASIC2.22□□□□□ -2.05
TNFSF9P41273 GSTA9P-201ENST00000406231 611 ntBASIC2.22□□□□□ -2.05
TNFSF9P41273 AL513331.1-201ENST00000411908 397 ntBASIC2.22□□□□□ -2.05
TNFSF9P41273 AC023141.4-201ENST00000412031 328 ntBASIC2.22□□□□□ -2.05
TNFSF9P41273 BTF3L4P3-201ENST00000418879 476 ntBASIC2.22□□□□□ -2.05
TNFSF9P41273 MTCO2P23-201ENST00000425216 680 ntBASIC2.22□□□□□ -2.05
TNFSF9P41273 AC027124.2-201ENST00000428249 105 ntBASIC2.22□□□□□ -2.05
TNFSF9P41273 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.22□□□□□ -2.05
TNFSF9P41273 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TNFSF9P41273 COX7BP2-201ENST00000437976 242 ntBASIC2.22□□□□□ -2.05
TNFSF9P41273 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.22□□□□□ -2.05
TNFSF9P41273 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.22□□□□□ -2.05
TNFSF9P41273 EXOSC3P1-201ENST00000448649 500 ntBASIC2.22□□□□□ -2.05
TNFSF9P41273 MEMO1P3-201ENST00000459811 302 ntBASIC2.22□□□□□ -2.05
TNFSF9P41273 MTND1P16-201ENST00000465177 898 ntBASIC2.22□□□□□ -2.05
TNFSF9P41273 AC107626.1-201ENST00000471084 183 ntBASIC2.22□□□□□ -2.05
TNFSF9P41273 TRBV1-201ENST00000476502 284 ntBASIC2.22□□□□□ -2.05
TNFSF9P41273 AC135721.1-201ENST00000497954 479 ntBASIC2.22□□□□□ -2.05
TNFSF9P41273 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.22□□□□□ -2.05
TNFSF9P41273 RNU6-390P-201ENST00000516259 103 ntBASIC2.22□□□□□ -2.05
TNFSF9P41273 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.22□□□□□ -2.05
TNFSF9P41273 SNRPGP19-201ENST00000603826 189 ntBASIC2.22□□□□□ -2.05
TNFSF9P41273 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.22□□□□□ -2.05
TNFSF9P41273 AL138478.1-201ENST00000612252 832 ntBASIC2.22□□□□□ -2.05
TNFSF9P41273 PART1_2.1-201ENST00000612397 250 ntBASIC2.22□□□□□ -2.05
TNFSF9P41273 TUG1_2.1-201ENST00000614234 87 ntBASIC2.22□□□□□ -2.05
TNFSF9P41273 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
TNFSF9P41273 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
TNFSF9P41273 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TNFSF9P41273 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
TNFSF9P41273 RNU6-744P-201ENST00000365557 107 ntBASIC2.21□□□□□ -2.06
TNFSF9P41273 RNA5SP88-201ENST00000365560 109 ntBASIC2.21□□□□□ -2.06
TNFSF9P41273 RNU6-1316P-201ENST00000384242 108 ntBASIC2.21□□□□□ -2.06
TNFSF9P41273 MIR888-201ENST00000401186 77 ntBASIC2.21□□□□□ -2.06
TNFSF9P41273 AL590084.2-201ENST00000401481 382 ntBASIC2.21□□□□□ -2.06
TNFSF9P41273 MIR1284-201ENST00000408337 120 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms