Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC127391.1-201ENST00000411737 98 ntBASIC3.24□□□□□ -1.89
HOXD13P35453 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXD13P35453 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.24□□□□□ -1.89
HOXD13P35453 AL645937.1-202ENST00000421799 937 ntBASIC3.24□□□□□ -1.89
HOXD13P35453 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXD13P35453 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.24□□□□□ -1.89
HOXD13P35453 SNORD42A-201ENST00000459584 64 ntBASIC3.24□□□□□ -1.89
HOXD13P35453 AC091179.1-201ENST00000461606 579 ntBASIC3.24□□□□□ -1.89
HOXD13P35453 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.24□□□□□ -1.89
HOXD13P35453 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.24□□□□□ -1.89
HOXD13P35453 RNU2-46P-201ENST00000517038 113 ntBASIC3.24□□□□□ -1.89
HOXD13P35453 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXD13P35453 HMGB1P41-201ENST00000520234 440 ntBASIC3.24□□□□□ -1.89
HOXD13P35453 AC060788.1-201ENST00000521318 469 ntBASIC3.24□□□□□ -1.89
HOXD13P35453 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.24□□□□□ -1.89
HOXD13P35453 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXD13P35453 AC015871.2-201ENST00000603605 948 ntBASIC3.24□□□□□ -1.89
HOXD13P35453 AL358072.1-201ENST00000604156 575 ntBASIC3.24□□□□□ -1.89
HOXD13P35453 AL133173.2-201ENST00000614270 90 ntBASIC3.24□□□□□ -1.89
HOXD13P35453 PISRT1-201ENST00000626175 531 ntBASIC3.24□□□□□ -1.89
HOXD13P35453 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXD13P35453 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HOXD13P35453 FARSBP1-201ENST00000435808 1778 ntBASIC3.24□□□□□ -1.89
HOXD13P35453 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXD13P35453 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXD13P35453 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HOXD13P35453 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXD13P35453 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXD13P35453 RNU6-288P-201ENST00000363690 104 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 SNORA20.2-201ENST00000383922 131 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 SNORA9-201ENST00000384215 133 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 RPS3AP36-201ENST00000398190 775 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HOXD13P35453 RPS12P24-201ENST00000412619 387 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 AC006946.1-201ENST00000429106 328 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 RPS24P1-201ENST00000438550 371 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 CYCSP32-201ENST00000440548 321 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXD13P35453 FABP5P15-201ENST00000453566 214 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 RPS29P26-201ENST00000477483 171 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.23□□□□□ -1.89
HOXD13P35453 RPL36AP51-201ENST00000487216 318 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 RPS15AP34-201ENST00000487776 387 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 RPS27P26-201ENST00000494583 239 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 AC091965.2-201ENST00000512324 613 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 Vault.3-201ENST00000516676 95 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 AC022634.1-201ENST00000520765 532 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.23□□□□□ -1.89
HOXD13P35453 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.23□□□□□ -1.89
HOXD13P35453 MIR4506-201ENST00000584693 77 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 SEPT7P9-203ENST00000604116 343 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 OR2AS2P-201ENST00000606902 342 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 AL451064.1-201ENST00000607718 471 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 AC091304.9-201ENST00000612091 226 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
HOXD13P35453 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 AC110994.2-201ENST00000635481 492 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 MTND5P42-201ENST00000637720 498 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
HOXD13P35453 AC008264.2-201ENST00000610193 3731 ntBASIC3.23□□□□□ -1.89
HOXD13P35453 FAM35CP-201ENST00000554755 2470 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 ZNF519P1-201ENST00000449011 1626 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HOXD13P35453 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
HOXD13P35453 RNU4-1-201ENST00000363925 141 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 SMIM11P1-201ENST00000369586 178 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 RNU6-190P-201ENST00000384154 102 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 MIR301A-201ENST00000385261 86 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 AL139397.2-201ENST00000404529 772 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 MIR1289-1-201ENST00000408836 144 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 RN7SKP123-201ENST00000410732 291 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 RNU6-193P-201ENST00000410977 107 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXD13P35453 RPL26P27-201ENST00000414397 437 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 AL591212.2-201ENST00000433923 257 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 RPL36AP6-201ENST00000435770 321 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXD13P35453 AC093899.1-201ENST00000457984 376 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 S100A11P2-201ENST00000467589 312 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 AC128713.1-201ENST00000471495 306 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 AC007182.2-201ENST00000489251 402 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 AC026801.1-201ENST00000497178 464 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.22□□□□□ -1.89
HOXD13P35453 RNA5SP341-201ENST00000516261 117 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXD13P35453 AL359212.1-201ENST00000556608 614 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 AC025281.1-201ENST00000567026 265 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 AC010653.1-201ENST00000571108 881 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXD13P35453 HMGN2P15-201ENST00000585707 270 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.22□□□□□ -1.89
HOXD13P35453 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXD13P35453 AL355877.2-201ENST00000603670 358 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 AL035413.2-201ENST00000604801 525 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 MTND4LP5-201ENST00000605152 292 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 AL161734.1-201ENST00000609720 557 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 AL158063.1-201ENST00000615349 536 ntBASIC3.22□□□□□ -1.89
HOXD13P35453 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms