Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 SEM1P1-201ENST00000506694 209 ntBASIC3.3□□□□□ -1.88
HOXC13P31276 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXC13P31276 AL133271.1-201ENST00000538229 291 ntBASIC3.3□□□□□ -1.88
HOXC13P31276 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC13P31276 SNORA59B-202ENST00000578183 701 ntBASIC3.3□□□□□ -1.88
HOXC13P31276 AC006504.3-201ENST00000586818 523 ntBASIC3.3□□□□□ -1.88
HOXC13P31276 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC13P31276 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC13P31276 AC131902.3-201ENST00000611767 581 ntBASIC3.3□□□□□ -1.88
HOXC13P31276 MIR7106-201ENST00000612419 65 ntBASIC3.3□□□□□ -1.88
HOXC13P31276 Z99129.1-201ENST00000612510 255 ntBASIC3.3□□□□□ -1.88
HOXC13P31276 uc_338.25-201ENST00000613756 156 ntBASIC3.3□□□□□ -1.88
HOXC13P31276 AC090132.2-201ENST00000615881 347 ntBASIC3.3□□□□□ -1.88
HOXC13P31276 AC009509.4-201ENST00000619202 509 ntBASIC3.3□□□□□ -1.88
HOXC13P31276 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC13P31276 AC018692.3-201ENST00000623929 123 ntBASIC3.3□□□□□ -1.88
HOXC13P31276 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC13P31276 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC13P31276 AC007785.2-201ENST00000598627 1916 ntBASIC3.3□□□□□ -1.88
HOXC13P31276 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXC13P31276 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC13P31276 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC13P31276 Y_RNA.18-201ENST00000362461 102 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 RNU6-741P-201ENST00000383889 107 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 RNU6-1119P-201ENST00000384349 108 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 AL138885.1-201ENST00000405921 675 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 RNU6-920P-201ENST00000410926 92 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 RNU2-25P-201ENST00000411041 191 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC13P31276 AL359704.1-201ENST00000411586 781 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 HMGB1P11-201ENST00000413899 637 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXC13P31276 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXC13P31276 FAM103A2P-201ENST00000444122 354 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 UBBP3-201ENST00000445497 241 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 FDX1P2-201ENST00000450769 375 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXC13P31276 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC13P31276 RPL30P6-201ENST00000475925 342 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 AC135721.1-201ENST00000497954 479 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC13P31276 FABP5P5-201ENST00000515537 406 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.29□□□□□ -1.88
HOXC13P31276 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC13P31276 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HOXC13P31276 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HOXC13P31276 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC13P31276 ANP32BP3-201ENST00000559213 706 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 AC092325.1-201ENST00000566449 554 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC13P31276 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC13P31276 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC13P31276 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC13P31276 AC116312.1-201ENST00000606841 314 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 AC007684.1-201ENST00000609671 477 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 AC004223.4-201ENST00000612426 332 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 AC093838.1-201ENST00000613014 469 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 AC025253.1-201ENST00000613623 543 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 AC010678.1-201ENST00000614118 713 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 AC004696.1-201ENST00000614345 607 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC13P31276 OR4G2P-202ENST00000641004 1759 ntBASIC3.29□□□□□ -1.88
HOXC13P31276 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXC13P31276 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
HOXC13P31276 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HOXC13P31276 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
HOXC13P31276 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HOXC13P31276 AL138713.1-201ENST00000624026 2130 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HOXC13P31276 RNU6-433P-201ENST00000363216 104 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 SNORA7.4-201ENST00000384249 137 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 SNORA54-201ENST00000384281 123 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 FO393413.1-201ENST00000402892 195 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 RNA5SP492-201ENST00000411330 114 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 RNA5SP107-201ENST00000411358 122 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 RPL31P12-201ENST00000422587 358 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 AL358075.3-201ENST00000426289 226 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 MTND1P2-201ENST00000430604 821 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 AC109583.1-201ENST00000432156 268 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 UBE2FP3-201ENST00000436366 524 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXC13P31276 AC107083.1-201ENST00000439643 279 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXC13P31276 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXC13P31276 AP1S2P1-201ENST00000457344 379 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 RPS20P20-201ENST00000460498 340 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXC13P31276 AC005178.1-201ENST00000508392 440 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXC13P31276 RNU6-718P-201ENST00000516166 105 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 AC009812.2-201ENST00000517657 457 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 ATP5F1P5-201ENST00000526403 760 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXC13P31276 AL355836.1-201ENST00000555951 870 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXC13P31276 AL157394.1-201ENST00000562983 1224 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 MIR544B-201ENST00000582372 78 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXC13P31276 WISP1-OT1-201ENST00000602893 642 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms