Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL022578.1-201ENST00000439330 1433 ntBASIC1.3□□□□□ -2.2
CLIP1P30622 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
CLIP1P30622 AC018630.2-201ENST00000534866 2403 ntBASIC1.3□□□□□ -2.2
CLIP1P30622 MIR147B-201ENST00000390185 80 ntBASIC1.3□□□□□ -2.2
CLIP1P30622 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.3□□□□□ -2.2
CLIP1P30622 OR9R1P-201ENST00000412200 877 ntBASIC1.3□□□□□ -2.2
CLIP1P30622 AL356320.2-201ENST00000417263 507 ntBASIC1.3□□□□□ -2.2
CLIP1P30622 EBAG9P1-201ENST00000418955 543 ntBASIC1.3□□□□□ -2.2
CLIP1P30622 AL596276.1-201ENST00000434465 418 ntBASIC1.3□□□□□ -2.2
CLIP1P30622 MTCYBP34-201ENST00000439552 670 ntBASIC1.3□□□□□ -2.2
CLIP1P30622 snoU13.4-201ENST00000458916 104 ntBASIC1.3□□□□□ -2.2
CLIP1P30622 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.3□□□□□ -2.2
CLIP1P30622 AC004062.1-201ENST00000509926 645 ntBASIC1.3□□□□□ -2.2
CLIP1P30622 AP003717.3-201ENST00000544832 1180 ntBASIC1.3□□□□□ -2.2
CLIP1P30622 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.3□□□□□ -2.2
CLIP1P30622 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.3□□□□□ -2.2
CLIP1P30622 MIR4299-201ENST00000577899 72 ntBASIC1.3□□□□□ -2.2
CLIP1P30622 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.3□□□□□ -2.2
CLIP1P30622 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.3□□□□□ -2.2
CLIP1P30622 AL360085.1-201ENST00000604713 532 ntBASIC1.3□□□□□ -2.2
CLIP1P30622 AL161629.2-201ENST00000615347 275 ntBASIC1.3□□□□□ -2.2
CLIP1P30622 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.29□□□□□ -2.2
CLIP1P30622 SNORD114-2-201ENST00000363953 78 ntBASIC1.29□□□□□ -2.2
CLIP1P30622 RNU6-17P-201ENST00000384245 107 ntBASIC1.29□□□□□ -2.2
CLIP1P30622 RNU6-18P-201ENST00000384527 107 ntBASIC1.29□□□□□ -2.2
CLIP1P30622 AL356131.1-201ENST00000405826 414 ntBASIC1.29□□□□□ -2.2
CLIP1P30622 AC098592.2-201ENST00000413158 265 ntBASIC1.29□□□□□ -2.2
CLIP1P30622 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.29□□□□□ -2.2
CLIP1P30622 MRPL35P3-201ENST00000421557 364 ntBASIC1.29□□□□□ -2.2
CLIP1P30622 KATNBL1P4-201ENST00000503545 918 ntBASIC1.29□□□□□ -2.2
CLIP1P30622 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.29□□□□□ -2.2
CLIP1P30622 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.29□□□□□ -2.2
CLIP1P30622 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.29□□□□□ -2.2
CLIP1P30622 AC069304.3-201ENST00000603938 1084 ntBASIC1.29□□□□□ -2.2
CLIP1P30622 AC008133.2-201ENST00000624540 351 ntBASIC1.29□□□□□ -2.2
CLIP1P30622 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.28□□□□□ -2.2
CLIP1P30622 CYCSP48-201ENST00000417124 323 ntBASIC1.28□□□□□ -2.2
CLIP1P30622 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CLIP1P30622 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.28□□□□□ -2.2
CLIP1P30622 RPL23AP3-201ENST00000453844 468 ntBASIC1.28□□□□□ -2.2
CLIP1P30622 AC021382.1-201ENST00000483523 359 ntBASIC1.28□□□□□ -2.2
CLIP1P30622 AP005902.1-201ENST00000521358 186 ntBASIC1.28□□□□□ -2.2
CLIP1P30622 AP005639.2-201ENST00000527592 928 ntBASIC1.28□□□□□ -2.2
CLIP1P30622 RRN3P3-201ENST00000549207 578 ntBASIC1.28□□□□□ -2.2
CLIP1P30622 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.28□□□□□ -2.2
CLIP1P30622 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.28□□□□□ -2.2
CLIP1P30622 AC019131.2-201ENST00000609071 870 ntBASIC1.28□□□□□ -2.2
CLIP1P30622 ICE2P2-201ENST00000483823 2787 ntBASIC1.28□□□□□ -2.2
CLIP1P30622 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.27□□□□□ -2.21
CLIP1P30622 FCF1P2-201ENST00000415284 583 ntBASIC1.27□□□□□ -2.21
CLIP1P30622 SEPT2P1-201ENST00000419651 180 ntBASIC1.27□□□□□ -2.21
CLIP1P30622 SFR1P2-201ENST00000421841 730 ntBASIC1.27□□□□□ -2.21
CLIP1P30622 EIF4EP4-201ENST00000424916 578 ntBASIC1.27□□□□□ -2.21
CLIP1P30622 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.27□□□□□ -2.21
CLIP1P30622 AC008676.3-201ENST00000521237 435 ntBASIC1.27□□□□□ -2.21
CLIP1P30622 AC112191.3-201ENST00000604371 277 ntBASIC1.27□□□□□ -2.21
CLIP1P30622 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.27□□□□□ -2.21
CLIP1P30622 UCA1.1-201ENST00000620952 75 ntBASIC1.27□□□□□ -2.21
CLIP1P30622 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
CLIP1P30622 BTF3L4P2-201ENST00000392798 346 ntBASIC1.26□□□□□ -2.21
CLIP1P30622 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.26□□□□□ -2.21
CLIP1P30622 UBE2V1P9-201ENST00000414760 368 ntBASIC1.26□□□□□ -2.21
CLIP1P30622 SNRPGP6-201ENST00000451124 220 ntBASIC1.26□□□□□ -2.21
CLIP1P30622 SYPL1P1-201ENST00000473622 768 ntBASIC1.26□□□□□ -2.21
CLIP1P30622 AC092989.1-201ENST00000481235 277 ntBASIC1.26□□□□□ -2.21
CLIP1P30622 AC018437.1-201ENST00000492214 406 ntBASIC1.26□□□□□ -2.21
CLIP1P30622 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.26□□□□□ -2.21
CLIP1P30622 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.26□□□□□ -2.21
CLIP1P30622 OR5AL2P-201ENST00000532185 920 ntBASIC1.26□□□□□ -2.21
CLIP1P30622 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.26□□□□□ -2.21
CLIP1P30622 CYCSP2-201ENST00000558168 301 ntBASIC1.26□□□□□ -2.21
CLIP1P30622 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.26□□□□□ -2.21
CLIP1P30622 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.26□□□□□ -2.21
CLIP1P30622 AC018755.4-201ENST00000619715 454 ntBASIC1.26□□□□□ -2.21
CLIP1P30622 CR848007.1-201ENST00000442354 1699 ntBASIC1.26□□□□□ -2.21
CLIP1P30622 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
CLIP1P30622 DEFB108F-201ENST00000344638 222 ntBASIC1.25□□□□□ -2.21
CLIP1P30622 MT-TP-201ENST00000387461 68 ntBASIC1.25□□□□□ -2.21
CLIP1P30622 Z86062.1-201ENST00000406773 777 ntBASIC1.25□□□□□ -2.21
CLIP1P30622 AL353689.1-201ENST00000438895 199 ntBASIC1.25□□□□□ -2.21
CLIP1P30622 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.25□□□□□ -2.21
CLIP1P30622 SNORA31.25-201ENST00000517242 134 ntBASIC1.25□□□□□ -2.21
CLIP1P30622 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.25□□□□□ -2.21
CLIP1P30622 AP001485.1-201ENST00000604799 199 ntBASIC1.25□□□□□ -2.21
CLIP1P30622 ZNF702P-202ENST00000434269 1966 ntBASIC1.25□□□□□ -2.21
CLIP1P30622 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.24□□□□□ -2.21
CLIP1P30622 RNU6-939P-201ENST00000384634 107 ntBASIC1.24□□□□□ -2.21
CLIP1P30622 HMGN1P33-201ENST00000432945 451 ntBASIC1.24□□□□□ -2.21
CLIP1P30622 MTATP6P7-201ENST00000453315 681 ntBASIC1.24□□□□□ -2.21
CLIP1P30622 AC005908.1-201ENST00000468701 347 ntBASIC1.24□□□□□ -2.21
CLIP1P30622 TRBV8-1-201ENST00000481590 279 ntBASIC1.24□□□□□ -2.21
CLIP1P30622 RNU6-351P-201ENST00000516097 100 ntBASIC1.24□□□□□ -2.21
CLIP1P30622 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.24□□□□□ -2.21
CLIP1P30622 FAM60BP-201ENST00000578364 658 ntBASIC1.24□□□□□ -2.21
CLIP1P30622 AL592148.2-201ENST00000612210 372 ntBASIC1.24□□□□□ -2.21
CLIP1P30622 FAM157B-203ENST00000639350 358 ntBASIC1.24□□□□□ -2.21
CLIP1P30622 MIR193B-201ENST00000384907 83 ntBASIC1.23□□□□□ -2.21
CLIP1P30622 AL353718.1-201ENST00000451028 517 ntBASIC1.23□□□□□ -2.21
CLIP1P30622 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.23□□□□□ -2.21
CLIP1P30622 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms