Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC011330.2-201ENST00000621680 635 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 AC132825.7-201ENST00000638744 335 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.55□□□□□ -2.16
COL4A5P29400 AL354685.2-201ENST00000448218 1447 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
COL4A5P29400 RNU6-650P-201ENST00000365658 111 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 RNU6-1005P-201ENST00000384519 107 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 MIR767-201ENST00000390228 109 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 RPS12P24-201ENST00000412619 387 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 AL512637.2-201ENST00000431287 1256 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 AC241584.1-201ENST00000438469 1241 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 AC114878.1-201ENST00000441166 358 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 RNF2P1-201ENST00000442955 1010 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 PABPC1P3-201ENST00000469174 459 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 MTCO2P9-201ENST00000503214 694 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.55□□□□□ -2.16
COL4A5P29400 RNU6-416P-201ENST00000516265 103 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.55□□□□□ -2.16
COL4A5P29400 CASP1P1-201ENST00000526345 212 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
COL4A5P29400 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
COL4A5P29400 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.55□□□□□ -2.16
COL4A5P29400 AL161734.1-201ENST00000609720 557 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 uc_338.20-201ENST00000621563 178 ntBASIC1.55□□□□□ -2.16
COL4A5P29400 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.55□□□□□ -2.16
COL4A5P29400 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.55□□□□□ -2.16
COL4A5P29400 AC008669.1-201ENST00000565823 2178 ntBASIC1.54□□□□□ -2.16
COL4A5P29400 AC103710.2-202ENST00000641454 2853 ntBASIC1.54□□□□□ -2.16
COL4A5P29400 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
COL4A5P29400 AC018630.2-202ENST00000422992 927 ntBASIC1.54□□□□□ -2.16
COL4A5P29400 UBBP3-201ENST00000445497 241 ntBASIC1.54□□□□□ -2.16
COL4A5P29400 NDUFA5P7-201ENST00000452914 242 ntBASIC1.54□□□□□ -2.16
COL4A5P29400 AL583843.1-201ENST00000456070 346 ntBASIC1.54□□□□□ -2.16
COL4A5P29400 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.54□□□□□ -2.16
COL4A5P29400 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.54□□□□□ -2.16
COL4A5P29400 RPL37P25-201ENST00000507308 276 ntBASIC1.54□□□□□ -2.16
COL4A5P29400 RN7SKP265-201ENST00000516448 223 ntBASIC1.54□□□□□ -2.16
COL4A5P29400 SNORA31.18-201ENST00000517043 134 ntBASIC1.54□□□□□ -2.16
COL4A5P29400 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.54□□□□□ -2.16
COL4A5P29400 AC087854.1-201ENST00000519706 414 ntBASIC1.54□□□□□ -2.16
COL4A5P29400 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.54□□□□□ -2.16
COL4A5P29400 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.54□□□□□ -2.16
COL4A5P29400 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.54□□□□□ -2.16
COL4A5P29400 AC091925.2-201ENST00000625059 256 ntBASIC1.54□□□□□ -2.16
COL4A5P29400 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
COL4A5P29400 RNU6-115P-201ENST00000364310 107 ntBASIC1.53□□□□□ -2.16
COL4A5P29400 Y_RNA.251-201ENST00000364551 99 ntBASIC1.53□□□□□ -2.16
COL4A5P29400 RNU6-198P-201ENST00000384258 104 ntBASIC1.53□□□□□ -2.16
COL4A5P29400 RNU1-139P-201ENST00000391307 165 ntBASIC1.53□□□□□ -2.16
COL4A5P29400 MIR1290-201ENST00000408735 78 ntBASIC1.53□□□□□ -2.16
COL4A5P29400 AC092573.2-201ENST00000434546 243 ntBASIC1.53□□□□□ -2.16
COL4A5P29400 MTND3P4-201ENST00000453537 303 ntBASIC1.53□□□□□ -2.16
COL4A5P29400 AL359385.1-201ENST00000456509 365 ntBASIC1.53□□□□□ -2.16
COL4A5P29400 MTND4LP3-201ENST00000468320 276 ntBASIC1.53□□□□□ -2.16
COL4A5P29400 RPL21P47-201ENST00000483696 477 ntBASIC1.53□□□□□ -2.16
COL4A5P29400 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.53□□□□□ -2.16
COL4A5P29400 COX7A2P2-201ENST00000505291 250 ntBASIC1.53□□□□□ -2.16
COL4A5P29400 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.53□□□□□ -2.16
COL4A5P29400 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.53□□□□□ -2.16
COL4A5P29400 OR5AQ1P-201ENST00000527596 927 ntBASIC1.53□□□□□ -2.16
COL4A5P29400 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.53□□□□□ -2.16
COL4A5P29400 MIR3609-201ENST00000582661 80 ntBASIC1.53□□□□□ -2.16
COL4A5P29400 U73023.1-201ENST00000603134 700 ntBASIC1.53□□□□□ -2.16
COL4A5P29400 AC004852.3-201ENST00000614131 326 ntBASIC1.53□□□□□ -2.16
COL4A5P29400 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.53□□□□□ -2.16
COL4A5P29400 AC009318.4-201ENST00000620496 486 ntBASIC1.53□□□□□ -2.16
COL4A5P29400 AC104820.1-201ENST00000624183 307 ntBASIC1.53□□□□□ -2.16
COL4A5P29400 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
COL4A5P29400 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.53□□□□□ -2.16
COL4A5P29400 AC135776.4-201ENST00000624300 1904 ntBASIC1.53□□□□□ -2.16
COL4A5P29400 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
COL4A5P29400 Y_RNA.68-201ENST00000362881 102 ntBASIC1.52□□□□□ -2.17
COL4A5P29400 SNORD51-201ENST00000384320 80 ntBASIC1.52□□□□□ -2.17
COL4A5P29400 RNY1P4-201ENST00000384595 115 ntBASIC1.52□□□□□ -2.17
COL4A5P29400 MIR16-1-201ENST00000385271 89 ntBASIC1.52□□□□□ -2.17
COL4A5P29400 AL033519.2-201ENST00000403958 392 ntBASIC1.52□□□□□ -2.17
COL4A5P29400 AL030996.1-201ENST00000411430 235 ntBASIC1.52□□□□□ -2.17
COL4A5P29400 AC244453.4-201ENST00000419150 388 ntBASIC1.52□□□□□ -2.17
COL4A5P29400 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.52□□□□□ -2.17
COL4A5P29400 AC246680.2-201ENST00000422106 389 ntBASIC1.52□□□□□ -2.17
COL4A5P29400 AL365496.1-201ENST00000426885 215 ntBASIC1.52□□□□□ -2.17
COL4A5P29400 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.52□□□□□ -2.17
COL4A5P29400 ZFAND6P1-201ENST00000434138 605 ntBASIC1.52□□□□□ -2.17
COL4A5P29400 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.52□□□□□ -2.17
COL4A5P29400 RPS15AP27-201ENST00000449183 343 ntBASIC1.52□□□□□ -2.17
COL4A5P29400 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.52□□□□□ -2.17
COL4A5P29400 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.52□□□□□ -2.17
COL4A5P29400 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.52□□□□□ -2.17
COL4A5P29400 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.52□□□□□ -2.17
COL4A5P29400 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.52□□□□□ -2.17
COL4A5P29400 AC022784.5-201ENST00000522241 437 ntBASIC1.52□□□□□ -2.17
COL4A5P29400 OR5AK1P-201ENST00000524837 922 ntBASIC1.52□□□□□ -2.17
COL4A5P29400 AP005435.4-201ENST00000529514 284 ntBASIC1.52□□□□□ -2.17
COL4A5P29400 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.52□□□□□ -2.17
COL4A5P29400 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.52□□□□□ -2.17
COL4A5P29400 AC109446.2-201ENST00000567872 497 ntBASIC1.52□□□□□ -2.17
COL4A5P29400 AC015688.2-201ENST00000584523 262 ntBASIC1.52□□□□□ -2.17
COL4A5P29400 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.52□□□□□ -2.17
COL4A5P29400 AC016727.2-201ENST00000603988 621 ntBASIC1.52□□□□□ -2.17
COL4A5P29400 AC093838.1-201ENST00000613014 469 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms