Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 MIR3662-201ENST00000637030 95 ntBASIC3.98□□□□□ -1.77
KCNA3P22001 CKAP2P1-201ENST00000555477 2049 ntBASIC3.98□□□□□ -1.77
KCNA3P22001 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.98□□□□□ -1.77
KCNA3P22001 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
KCNA3P22001 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.98□□□□□ -1.77
KCNA3P22001 CASC19-280ENST00000642102 1351 ntBASIC3.98□□□□□ -1.77
KCNA3P22001 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
KCNA3P22001 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KCNA3P22001 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
KCNA3P22001 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.97□□□□□ -1.77
KCNA3P22001 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
KCNA3P22001 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
KCNA3P22001 RNU6-606P-201ENST00000384721 111 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 RNU6-876P-201ENST00000391295 104 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 AL136372.1-201ENST00000403060 228 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 RNU2-43P-201ENST00000410306 190 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 RPL21P24-201ENST00000413752 448 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 EEF1A1P41-201ENST00000414667 207 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 AC138393.2-201ENST00000414742 246 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.97□□□□□ -1.77
KCNA3P22001 AL139281.1-201ENST00000422120 335 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 OR2AS1P-201ENST00000427827 319 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 GTF2IP20-201ENST00000431663 360 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 AL138799.3-201ENST00000438968 350 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.97□□□□□ -1.77
KCNA3P22001 DDX3P2-201ENST00000446138 111 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 SNRPGP6-201ENST00000451124 220 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 HMGN2P7-201ENST00000456186 273 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 RNU7-63P-201ENST00000459054 62 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.97□□□□□ -1.77
KCNA3P22001 RPS29P25-201ENST00000481709 171 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.97□□□□□ -1.77
KCNA3P22001 SNORD27.1-201ENST00000516319 72 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.97□□□□□ -1.77
KCNA3P22001 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.97□□□□□ -1.77
KCNA3P22001 AC123904.3-201ENST00000547218 814 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 ARL2BPP2-201ENST00000550907 489 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.97□□□□□ -1.77
KCNA3P22001 AC055876.1-202ENST00000567053 138 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 MIR4293-201ENST00000584305 78 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 AC060780.3-201ENST00000589464 80 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 XIAPP1-201ENST00000603162 600 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 TUG1_2.1-201ENST00000614234 87 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 uc_338.32-201ENST00000615087 172 ntBASIC3.97□□□□□ -1.77
KCNA3P22001 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.97□□□□□ -1.77
KCNA3P22001 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.97□□□□□ -1.77
KCNA3P22001 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.97□□□□□ -1.77
KCNA3P22001 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.97□□□□□ -1.77
KCNA3P22001 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
KCNA3P22001 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.97□□□□□ -1.77
KCNA3P22001 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KCNA3P22001 AL136360.1-201ENST00000503377 1900 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
KCNA3P22001 Y_RNA.22-201ENST00000362492 102 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 SNORA72.1-201ENST00000363485 129 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 RNY3P3-201ENST00000363816 102 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 U3.15-201ENST00000365398 212 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 Y_RNA.367-201ENST00000365544 101 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 RNU4-48P-201ENST00000365559 182 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KCNA3P22001 SNORA69-201ENST00000383895 132 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 OR51A5P-201ENST00000415429 942 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 MTCO3P12-201ENST00000416718 547 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 SSXP9-201ENST00000417503 292 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.96□□□□□ -1.78
KCNA3P22001 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 AC016691.1-201ENST00000441321 413 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 AL162389.1-201ENST00000449233 177 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 ELOCP23-201ENST00000452014 332 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.96□□□□□ -1.78
KCNA3P22001 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.96□□□□□ -1.78
KCNA3P22001 AL356010.1-201ENST00000456364 102 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.96□□□□□ -1.78
KCNA3P22001 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KCNA3P22001 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.96□□□□□ -1.78
KCNA3P22001 RNU6-835P-201ENST00000516974 104 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.96□□□□□ -1.78
KCNA3P22001 NDUFB9P3-201ENST00000521269 501 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 AC100870.1-201ENST00000522035 505 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.96□□□□□ -1.78
KCNA3P22001 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.96□□□□□ -1.78
KCNA3P22001 AC125611.2-201ENST00000551907 647 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 SNORD84-203ENST00000584275 78 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 ELOCP29-201ENST00000588193 334 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.96□□□□□ -1.78
KCNA3P22001 AL121992.2-201ENST00000606262 256 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.96□□□□□ -1.78
KCNA3P22001 AL157817.1-201ENST00000614264 790 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 AL450472.3-201ENST00000615578 367 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 AC092794.2-201ENST00000620933 563 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 AC009033.1-201ENST00000624279 431 ntBASIC3.96□□□□□ -1.78
KCNA3P22001 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KCNA3P22001 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KCNA3P22001 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KCNA3P22001 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KCNA3P22001 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.95□□□□□ -1.78
KCNA3P22001 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KCNA3P22001 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.95□□□□□ -1.78
KCNA3P22001 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms