Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RN7SKP167-201ENST00000411047 285 ntBASIC5.01□□□□□ -1.61
ERCC3P19447 RNU6-607P-201ENST00000411283 108 ntBASIC5.01□□□□□ -1.61
ERCC3P19447 AL353621.1-201ENST00000418219 243 ntBASIC5.01□□□□□ -1.61
ERCC3P19447 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.01□□□□□ -1.61
ERCC3P19447 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.01□□□□□ -1.61
ERCC3P19447 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
ERCC3P19447 RPL30P5-201ENST00000494923 336 ntBASIC5.01□□□□□ -1.61
ERCC3P19447 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ERCC3P19447 RNA5SP154-201ENST00000516193 111 ntBASIC5.01□□□□□ -1.61
ERCC3P19447 AC104576.1-201ENST00000524225 88 ntBASIC5.01□□□□□ -1.61
ERCC3P19447 CASP1P1-201ENST00000526345 212 ntBASIC5.01□□□□□ -1.61
ERCC3P19447 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.01□□□□□ -1.61
ERCC3P19447 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
ERCC3P19447 AC010378.1-201ENST00000619270 362 ntBASIC5.01□□□□□ -1.61
ERCC3P19447 AC099506.2-201ENST00000623074 221 ntBASIC5.01□□□□□ -1.61
ERCC3P19447 AC008785.1-201ENST00000624475 456 ntBASIC5.01□□□□□ -1.61
ERCC3P19447 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.01□□□□□ -1.61
ERCC3P19447 AL049641.1-201ENST00000441055 1948 ntBASIC5.01□□□□□ -1.61
ERCC3P19447 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
ERCC3P19447 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.01□□□□□ -1.61
ERCC3P19447 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.01□□□□□ -1.61
ERCC3P19447 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5□□□□□ -1.61
ERCC3P19447 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ERCC3P19447 MIR412-201ENST00000362142 91 ntBASIC5□□□□□ -1.61
ERCC3P19447 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5□□□□□ -1.61
ERCC3P19447 MIR195-201ENST00000385194 87 ntBASIC5□□□□□ -1.61
ERCC3P19447 RN7SKP158-201ENST00000410453 326 ntBASIC5□□□□□ -1.61
ERCC3P19447 RPS20P14-201ENST00000412545 360 ntBASIC5□□□□□ -1.61
ERCC3P19447 AL356095.1-201ENST00000417217 199 ntBASIC5□□□□□ -1.61
ERCC3P19447 AC004552.1-201ENST00000419089 348 ntBASIC5□□□□□ -1.61
ERCC3P19447 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5□□□□□ -1.61
ERCC3P19447 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5□□□□□ -1.61
ERCC3P19447 SNRPEP9-201ENST00000436794 238 ntBASIC5□□□□□ -1.61
ERCC3P19447 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5□□□□□ -1.61
ERCC3P19447 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC5□□□□□ -1.61
ERCC3P19447 SNORA84-201ENST00000459229 133 ntBASIC5□□□□□ -1.61
ERCC3P19447 RPS26P3-201ENST00000470205 348 ntBASIC5□□□□□ -1.61
ERCC3P19447 AC084198.1-201ENST00000477747 402 ntBASIC5□□□□□ -1.61
ERCC3P19447 AC090543.2-201ENST00000483963 348 ntBASIC5□□□□□ -1.61
ERCC3P19447 AC004057.1-201ENST00000485827 348 ntBASIC5□□□□□ -1.61
ERCC3P19447 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5□□□□□ -1.61
ERCC3P19447 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5□□□□□ -1.61
ERCC3P19447 RNU1-86P-201ENST00000516108 154 ntBASIC5□□□□□ -1.61
ERCC3P19447 RNU1-107P-201ENST00000516617 154 ntBASIC5□□□□□ -1.61
ERCC3P19447 RNU6-572P-201ENST00000516724 80 ntBASIC5□□□□□ -1.61
ERCC3P19447 RNU1-54P-201ENST00000517181 120 ntBASIC5□□□□□ -1.61
ERCC3P19447 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5□□□□□ -1.61
ERCC3P19447 MIR6867-201ENST00000610636 67 ntBASIC5□□□□□ -1.61
ERCC3P19447 AC005344.1-201ENST00000613391 459 ntBASIC5□□□□□ -1.61
ERCC3P19447 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5□□□□□ -1.61
ERCC3P19447 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
ERCC3P19447 AC112484.5-201ENST00000624189 228 ntBASIC5□□□□□ -1.61
ERCC3P19447 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5□□□□□ -1.61
ERCC3P19447 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
ERCC3P19447 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5□□□□□ -1.61
ERCC3P19447 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
ERCC3P19447 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5□□□□□ -1.61
ERCC3P19447 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
ERCC3P19447 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
ERCC3P19447 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ERCC3P19447 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5□□□□□ -1.61
ERCC3P19447 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ERCC3P19447 AL391417.1-201ENST00000404100 426 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 FABP5P14-201ENST00000437273 393 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.99□□□□□ -1.61
ERCC3P19447 ANP32BP2-201ENST00000454525 545 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 RPL12P25-201ENST00000455592 494 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 HMGN2P7-201ENST00000456186 273 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.99□□□□□ -1.61
ERCC3P19447 AL132838.2-201ENST00000492041 314 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.99□□□□□ -1.61
ERCC3P19447 RN7SL812P-201ENST00000493791 279 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 AC026801.1-201ENST00000497178 464 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 AC096745.1-201ENST00000509945 370 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 NDUFB4P9-201ENST00000511646 388 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 RN7SKP13-201ENST00000515933 244 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 RNA5SP446-201ENST00000515955 82 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 SNORA70.14-201ENST00000516205 110 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 SNORA31.19-201ENST00000517079 126 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 AC069240.1-201ENST00000548774 375 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.99□□□□□ -1.61
ERCC3P19447 LRRC37A5P-203ENST00000580181 585 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 AC006130.2-201ENST00000586202 326 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 AC008638.3-201ENST00000603341 463 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 AC136601.2-201ENST00000604356 474 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 AL354984.3-201ENST00000604803 325 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ERCC3P19447 AL627309.6-201ENST00000606857 840 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.99□□□□□ -1.61
ERCC3P19447 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.99□□□□□ -1.61
ERCC3P19447 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ERCC3P19447 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ERCC3P19447 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ERCC3P19447 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.99□□□□□ -1.61
ERCC3P19447 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
ERCC3P19447 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
ERCC3P19447 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms