Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AP003399.1-201ENST00000637534 361 ntBASIC2.56□□□□□ -2
XRCC1P18887 AC006927.3-201ENST00000638789 384 ntBASIC2.56□□□□□ -2
XRCC1P18887 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.56□□□□□ -2
XRCC1P18887 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.56□□□□□ -2
XRCC1P18887 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
XRCC1P18887 RNU6-500P-201ENST00000362349 107 ntBASIC2.55□□□□□ -2
XRCC1P18887 RNU6-1284P-201ENST00000363701 100 ntBASIC2.55□□□□□ -2
XRCC1P18887 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
XRCC1P18887 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.55□□□□□ -2
XRCC1P18887 RNU6-140P-201ENST00000384566 108 ntBASIC2.55□□□□□ -2
XRCC1P18887 U8.14-201ENST00000390843 143 ntBASIC2.55□□□□□ -2
XRCC1P18887 RNA5SP181-201ENST00000410246 98 ntBASIC2.55□□□□□ -2
XRCC1P18887 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.55□□□□□ -2
XRCC1P18887 USP9YP13-201ENST00000417797 480 ntBASIC2.55□□□□□ -2
XRCC1P18887 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.55□□□□□ -2
XRCC1P18887 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.55□□□□□ -2
XRCC1P18887 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.55□□□□□ -2
XRCC1P18887 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.55□□□□□ -2
XRCC1P18887 AC126389.1-201ENST00000477436 290 ntBASIC2.55□□□□□ -2
XRCC1P18887 SRIP1-201ENST00000489235 288 ntBASIC2.55□□□□□ -2
XRCC1P18887 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.55□□□□□ -2
XRCC1P18887 RPL23AP94-201ENST00000512518 302 ntBASIC2.55□□□□□ -2
XRCC1P18887 AC112673.1-201ENST00000513168 575 ntBASIC2.55□□□□□ -2
XRCC1P18887 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
XRCC1P18887 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
XRCC1P18887 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.55□□□□□ -2
XRCC1P18887 AC068135.2-201ENST00000569293 1028 ntBASIC2.55□□□□□ -2
XRCC1P18887 MIR4635-201ENST00000583759 79 ntBASIC2.55□□□□□ -2
XRCC1P18887 AC060766.3-201ENST00000591442 263 ntBASIC2.55□□□□□ -2
XRCC1P18887 AC136601.2-201ENST00000604356 474 ntBASIC2.55□□□□□ -2
XRCC1P18887 AL355472.4-201ENST00000610233 626 ntBASIC2.55□□□□□ -2
XRCC1P18887 FTX_3.1-201ENST00000610451 147 ntBASIC2.55□□□□□ -2
XRCC1P18887 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.55□□□□□ -2
XRCC1P18887 AC079395.3-201ENST00000615161 484 ntBASIC2.55□□□□□ -2
XRCC1P18887 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.55□□□□□ -2
XRCC1P18887 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.55□□□□□ -2
XRCC1P18887 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.54□□□□□ -2
XRCC1P18887 ZNF519P1-201ENST00000449011 1626 ntBASIC2.54□□□□□ -2
XRCC1P18887 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.54□□□□□ -2
XRCC1P18887 FTLP6-201ENST00000355274 422 ntBASIC2.54□□□□□ -2
XRCC1P18887 MIR449A-201ENST00000362113 91 ntBASIC2.54□□□□□ -2
XRCC1P18887 RNU6-660P-201ENST00000364566 109 ntBASIC2.54□□□□□ -2
XRCC1P18887 RNU6-1180P-201ENST00000364935 107 ntBASIC2.54□□□□□ -2
XRCC1P18887 RNA5SP354-201ENST00000391247 136 ntBASIC2.54□□□□□ -2
XRCC1P18887 AL139039.1-201ENST00000401900 692 ntBASIC2.54□□□□□ -2
XRCC1P18887 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.54□□□□□ -2
XRCC1P18887 AL359634.1-202ENST00000404721 284 ntBASIC2.54□□□□□ -2
XRCC1P18887 AC078974.1-201ENST00000411597 223 ntBASIC2.54□□□□□ -2
XRCC1P18887 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.54□□□□□ -2
XRCC1P18887 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.54□□□□□ -2
XRCC1P18887 MTND5P2-201ENST00000442927 1142 ntBASIC2.54□□□□□ -2
XRCC1P18887 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.54□□□□□ -2
XRCC1P18887 RPS3P1-201ENST00000456781 192 ntBASIC2.54□□□□□ -2
XRCC1P18887 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.54□□□□□ -2
XRCC1P18887 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.54□□□□□ -2
XRCC1P18887 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.54□□□□□ -2
XRCC1P18887 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.54□□□□□ -2
XRCC1P18887 AC114781.4-201ENST00000513707 639 ntBASIC2.54□□□□□ -2
XRCC1P18887 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.54□□□□□ -2
XRCC1P18887 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.54□□□□□ -2
XRCC1P18887 RPPH1-2P-201ENST00000516688 293 ntBASIC2.54□□□□□ -2
XRCC1P18887 RNU6-201P-201ENST00000517100 61 ntBASIC2.54□□□□□ -2
XRCC1P18887 RNU6-64P-201ENST00000517119 105 ntBASIC2.54□□□□□ -2
XRCC1P18887 RN7SKP258-201ENST00000517151 304 ntBASIC2.54□□□□□ -2
XRCC1P18887 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.54□□□□□ -2
XRCC1P18887 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.54□□□□□ -2
XRCC1P18887 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.54□□□□□ -2
XRCC1P18887 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.54□□□□□ -2
XRCC1P18887 PCMTD1P2-201ENST00000565017 355 ntBASIC2.54□□□□□ -2
XRCC1P18887 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.54□□□□□ -2
XRCC1P18887 AL356432.3-201ENST00000568952 465 ntBASIC2.54□□□□□ -2
XRCC1P18887 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.54□□□□□ -2
XRCC1P18887 KC877982.1-201ENST00000602313 470 ntBASIC2.54□□□□□ -2
XRCC1P18887 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.54□□□□□ -2
XRCC1P18887 AL137847.3-201ENST00000611521 109 ntBASIC2.54□□□□□ -2
XRCC1P18887 AC245517.5-201ENST00000611529 162 ntBASIC2.54□□□□□ -2
XRCC1P18887 MIR6817-201ENST00000615588 66 ntBASIC2.54□□□□□ -2
XRCC1P18887 AC110079.1-202ENST00000635213 138 ntBASIC2.54□□□□□ -2
XRCC1P18887 AC007671.2-201ENST00000637344 619 ntBASIC2.54□□□□□ -2
XRCC1P18887 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
XRCC1P18887 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
XRCC1P18887 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.54□□□□□ -2
XRCC1P18887 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.54□□□□□ -2
XRCC1P18887 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.53□□□□□ -2
XRCC1P18887 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
XRCC1P18887 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
XRCC1P18887 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.53□□□□□ -2
XRCC1P18887 SNORD62.1-201ENST00000362541 86 ntBASIC2.53□□□□□ -2
XRCC1P18887 Y_RNA.46-201ENST00000362695 102 ntBASIC2.53□□□□□ -2
XRCC1P18887 MIR888-201ENST00000401186 77 ntBASIC2.53□□□□□ -2
XRCC1P18887 AL356057.2-201ENST00000403318 432 ntBASIC2.53□□□□□ -2
XRCC1P18887 RNU2-62P-201ENST00000410868 191 ntBASIC2.53□□□□□ -2
XRCC1P18887 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.53□□□□□ -2
XRCC1P18887 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.53□□□□□ -2
XRCC1P18887 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.53□□□□□ -2
XRCC1P18887 AC011816.1-201ENST00000441346 546 ntBASIC2.53□□□□□ -2
XRCC1P18887 DDX3P2-201ENST00000446138 111 ntBASIC2.53□□□□□ -2
XRCC1P18887 AC009961.3-201ENST00000449832 765 ntBASIC2.53□□□□□ -2
XRCC1P18887 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.53□□□□□ -2
XRCC1P18887 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms