Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 RNA5SP384-201ENST00000516615 116 ntBASIC5.01□□□□□ -1.61
LIG1P18858 AC005357.1-201ENST00000588399 301 ntBASIC5.01□□□□□ -1.61
LIG1P18858 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
LIG1P18858 AL355297.3-201ENST00000604082 446 ntBASIC5.01□□□□□ -1.61
LIG1P18858 U2.1-201ENST00000618978 145 ntBASIC5.01□□□□□ -1.61
LIG1P18858 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
LIG1P18858 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
LIG1P18858 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LIG1P18858 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LIG1P18858 RAD17P1-201ENST00000418130 2042 ntBASIC5.01□□□□□ -1.61
LIG1P18858 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
LIG1P18858 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5□□□□□ -1.61
LIG1P18858 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
LIG1P18858 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
LIG1P18858 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5□□□□□ -1.61
LIG1P18858 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LIG1P18858 RNA5SP447-201ENST00000363749 119 ntBASIC5□□□□□ -1.61
LIG1P18858 Y_RNA.307-201ENST00000365022 117 ntBASIC5□□□□□ -1.61
LIG1P18858 Y_RNA.380-201ENST00000365663 111 ntBASIC5□□□□□ -1.61
LIG1P18858 MIR93-201ENST00000385024 80 ntBASIC5□□□□□ -1.61
LIG1P18858 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC5□□□□□ -1.61
LIG1P18858 RNU6-823P-201ENST00000391042 103 ntBASIC5□□□□□ -1.61
LIG1P18858 SNORD66.1-201ENST00000391230 76 ntBASIC5□□□□□ -1.61
LIG1P18858 RNU2-23P-201ENST00000410545 195 ntBASIC5□□□□□ -1.61
LIG1P18858 RNU6-55P-201ENST00000411092 107 ntBASIC5□□□□□ -1.61
LIG1P18858 RNU6-293P-201ENST00000411259 106 ntBASIC5□□□□□ -1.61
LIG1P18858 FAR2P2-201ENST00000413041 594 ntBASIC5□□□□□ -1.61
LIG1P18858 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5□□□□□ -1.61
LIG1P18858 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5□□□□□ -1.61
LIG1P18858 AL645568.3-201ENST00000433683 316 ntBASIC5□□□□□ -1.61
LIG1P18858 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5□□□□□ -1.61
LIG1P18858 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5□□□□□ -1.61
LIG1P18858 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5□□□□□ -1.61
LIG1P18858 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5□□□□□ -1.61
LIG1P18858 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5□□□□□ -1.61
LIG1P18858 RPL9P32-201ENST00000464118 620 ntBASIC5□□□□□ -1.61
LIG1P18858 RNA5SP154-201ENST00000516193 111 ntBASIC5□□□□□ -1.61
LIG1P18858 Y_RNA.689-201ENST00000516589 107 ntBASIC5□□□□□ -1.61
LIG1P18858 RNU6-388P-201ENST00000517012 105 ntBASIC5□□□□□ -1.61
LIG1P18858 RNU6-389P-201ENST00000517048 105 ntBASIC5□□□□□ -1.61
LIG1P18858 AP006587.4-201ENST00000526053 529 ntBASIC5□□□□□ -1.61
LIG1P18858 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5□□□□□ -1.61
LIG1P18858 AC091516.1-201ENST00000549191 703 ntBASIC5□□□□□ -1.61
LIG1P18858 AC084783.1-201ENST00000565846 910 ntBASIC5□□□□□ -1.61
LIG1P18858 MIR4277-201ENST00000578298 84 ntBASIC5□□□□□ -1.61
LIG1P18858 AL109918.3-201ENST00000603072 338 ntBASIC5□□□□□ -1.61
LIG1P18858 AC104763.2-201ENST00000604179 382 ntBASIC5□□□□□ -1.61
LIG1P18858 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5□□□□□ -1.61
LIG1P18858 MIR7641-1-201ENST00000627518 61 ntBASIC5□□□□□ -1.61
LIG1P18858 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5□□□□□ -1.61
LIG1P18858 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5□□□□□ -1.61
LIG1P18858 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
LIG1P18858 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5□□□□□ -1.61
LIG1P18858 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5□□□□□ -1.61
LIG1P18858 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIG1P18858 AC091812.1-201ENST00000432235 1948 ntBASIC4.99□□□□□ -1.61
LIG1P18858 HSPA8P4-201ENST00000511877 1920 ntBASIC4.99□□□□□ -1.61
LIG1P18858 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIG1P18858 NOL8P1-201ENST00000508336 3529 ntBASIC4.99□□□□□ -1.61
LIG1P18858 PABPC1P7-201ENST00000413177 1513 ntBASIC4.99□□□□□ -1.61
LIG1P18858 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIG1P18858 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIG1P18858 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LIG1P18858 RHOT1P2-201ENST00000366423 333 ntBASIC4.99□□□□□ -1.61
LIG1P18858 Y_RNA.489-201ENST00000384410 101 ntBASIC4.99□□□□□ -1.61
LIG1P18858 MIR129-1-201ENST00000384972 72 ntBASIC4.99□□□□□ -1.61
LIG1P18858 AC011933.1-201ENST00000413334 321 ntBASIC4.99□□□□□ -1.61
LIG1P18858 AC092447.6-201ENST00000414578 210 ntBASIC4.99□□□□□ -1.61
LIG1P18858 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.99□□□□□ -1.61
LIG1P18858 CYCSP43-201ENST00000438233 310 ntBASIC4.99□□□□□ -1.61
LIG1P18858 AC099799.1-201ENST00000439809 192 ntBASIC4.99□□□□□ -1.61
LIG1P18858 AC008264.1-201ENST00000447612 367 ntBASIC4.99□□□□□ -1.61
LIG1P18858 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.99□□□□□ -1.61
LIG1P18858 AC026979.1-201ENST00000492525 396 ntBASIC4.99□□□□□ -1.61
LIG1P18858 AC107222.1-201ENST00000510899 637 ntBASIC4.99□□□□□ -1.61
LIG1P18858 AC006499.6-201ENST00000511169 607 ntBASIC4.99□□□□□ -1.61
LIG1P18858 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.99□□□□□ -1.61
LIG1P18858 RNU6-120P-201ENST00000516077 103 ntBASIC4.99□□□□□ -1.61
LIG1P18858 RNU4-77P-201ENST00000516692 156 ntBASIC4.99□□□□□ -1.61
LIG1P18858 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.99□□□□□ -1.61
LIG1P18858 AC022616.4-201ENST00000522985 181 ntBASIC4.99□□□□□ -1.61
LIG1P18858 AP000827.1-201ENST00000527814 258 ntBASIC4.99□□□□□ -1.61
LIG1P18858 AP004242.1-201ENST00000533701 349 ntBASIC4.99□□□□□ -1.61
LIG1P18858 AL034351.1-201ENST00000605288 668 ntBASIC4.99□□□□□ -1.61
LIG1P18858 MIR378J-201ENST00000611988 109 ntBASIC4.99□□□□□ -1.61
LIG1P18858 AC023043.4-201ENST00000612081 449 ntBASIC4.99□□□□□ -1.61
LIG1P18858 AC243312.2-201ENST00000623340 601 ntBASIC4.99□□□□□ -1.61
LIG1P18858 AL606534.2-204ENST00000635008 178 ntBASIC4.99□□□□□ -1.61
LIG1P18858 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LIG1P18858 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.99□□□□□ -1.61
LIG1P18858 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIG1P18858 AC125257.1-201ENST00000560400 2930 ntBASIC4.99□□□□□ -1.61
LIG1P18858 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.99□□□□□ -1.61
LIG1P18858 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
LIG1P18858 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIG1P18858 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIG1P18858 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LIG1P18858 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
LIG1P18858 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIG1P18858 Y_RNA.2-201ENST00000362330 96 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms