Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 AC104260.2-201ENST00000623551 3497 ntBASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 Y_RNA.2-201ENST00000362330 96 ntBASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 Y_RNA.555-201ENST00000384673 110 ntBASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 SNORD70.1-201ENST00000391007 85 ntBASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 RNU6-55P-201ENST00000411092 107 ntBASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 AL590135.1-201ENST00000422215 156 ntBASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 MTATP6P4-201ENST00000427725 675 ntBASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 RPL23AP50-201ENST00000434149 455 ntBASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 CHEK2P4-201ENST00000450340 246 ntBASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 AC117503.1-201ENST00000472241 394 ntBASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 AC146944.2-203ENST00000502493 354 ntBASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 AC139495.1-202ENST00000513164 354 ntBASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 AC015912.2-201ENST00000571053 181 ntBASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 AL512643.1-201ENST00000635735 524 ntBASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 AL365440.1-201ENST00000436135 2167 ntBASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CSB-PGBD3P0DP91 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 RLIMP1-201ENST00000339626 1680 ntBASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 RNU4-44P-201ENST00000363050 141 ntBASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 Y_RNA.214-201ENST00000364201 112 ntBASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 RNU6-806P-201ENST00000365147 105 ntBASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 RNU6-128P-201ENST00000383976 107 ntBASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 RNU6-14P-201ENST00000384630 106 ntBASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 SNORA16.2-201ENST00000390991 127 ntBASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 AC244098.2-201ENST00000422068 99 ntBASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 ELOCP20-201ENST00000422460 345 ntBASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 AC079780.1-201ENST00000428259 207 ntBASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 RPL26P6-201ENST00000440913 438 ntBASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 RNU6-953P-201ENST00000459154 107 ntBASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 RPL23AP2-201ENST00000471227 466 ntBASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 AP001086.1-201ENST00000494882 321 ntBASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 SNORA14.1-201ENST00000516113 141 ntBASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 OR5D17P-201ENST00000531492 978 ntBASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 AC022080.3-201ENST00000544433 482 ntBASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 AC005951.2-201ENST00000576282 495 ntBASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 MIR3941-201ENST00000582572 103 ntBASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 AC053481.4-201ENST00000583164 216 ntBASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 U2.17-201ENST00000611454 95 ntBASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 AC009812.4-201ENST00000569134 1805 ntBASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CSB-PGBD3P0DP91 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 RNA5SP175-201ENST00000364275 119 ntBASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 RNA5SP235-201ENST00000365411 114 ntBASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 SNORD14.1-201ENST00000365609 90 ntBASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 RNU6-629P-201ENST00000384061 103 ntBASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 RPLP0P7-201ENST00000416050 667 ntBASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 AC073910.1-201ENST00000445047 438 ntBASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 AL358232.1-201ENST00000448030 501 ntBASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 RPL39P38-201ENST00000467018 153 ntBASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 RPL35AP15-201ENST00000468042 339 ntBASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 AC105758.1-201ENST00000506038 399 ntBASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 RNA5SP230-201ENST00000517039 122 ntBASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 RNU6-111P-201ENST00000517179 105 ntBASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 AP004371.1-201ENST00000525240 214 ntBASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 HSPE1P20-201ENST00000538133 289 ntBASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.79□□□□□ -1.48
CSB-PGBD3P0DP91 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms