Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.11□□□□□ -2.07
TPM1P09493 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.11□□□□□ -2.07
TPM1P09493 MRPS33P3-201ENST00000513456 322 ntBASIC2.11□□□□□ -2.07
TPM1P09493 RNA5SP112-201ENST00000515937 99 ntBASIC2.11□□□□□ -2.07
TPM1P09493 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.11□□□□□ -2.07
TPM1P09493 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.11□□□□□ -2.07
TPM1P09493 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.11□□□□□ -2.07
TPM1P09493 AC022662.1-201ENST00000580252 331 ntBASIC2.11□□□□□ -2.07
TPM1P09493 AC098483.2-201ENST00000603158 454 ntBASIC2.11□□□□□ -2.07
TPM1P09493 AC069304.2-201ENST00000605154 435 ntBASIC2.11□□□□□ -2.07
TPM1P09493 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TPM1P09493 AC009268.2-201ENST00000621925 457 ntBASIC2.11□□□□□ -2.07
TPM1P09493 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.11□□□□□ -2.07
TPM1P09493 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TPM1P09493 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.11□□□□□ -2.07
TPM1P09493 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
TPM1P09493 CDR1-202ENST00000625883 1485 ntBASIC2.1□□□□□ -2.07
TPM1P09493 MIR676-201ENST00000390702 67 ntBASIC2.1□□□□□ -2.07
TPM1P09493 RNU6-754P-201ENST00000391166 107 ntBASIC2.1□□□□□ -2.07
TPM1P09493 AL512604.1-201ENST00000404812 257 ntBASIC2.1□□□□□ -2.07
TPM1P09493 TXNP7-201ENST00000406296 293 ntBASIC2.1□□□□□ -2.07
TPM1P09493 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.1□□□□□ -2.07
TPM1P09493 AL135786.1-201ENST00000415892 214 ntBASIC2.1□□□□□ -2.07
TPM1P09493 EDDM3CP-201ENST00000415977 425 ntBASIC2.1□□□□□ -2.07
TPM1P09493 ELOCP14-201ENST00000428070 331 ntBASIC2.1□□□□□ -2.07
TPM1P09493 AC092634.2-201ENST00000428146 1010 ntBASIC2.1□□□□□ -2.07
TPM1P09493 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC2.1□□□□□ -2.07
TPM1P09493 ELOCP7-201ENST00000439968 331 ntBASIC2.1□□□□□ -2.07
TPM1P09493 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.1□□□□□ -2.07
TPM1P09493 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.1□□□□□ -2.07
TPM1P09493 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.1□□□□□ -2.07
TPM1P09493 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.1□□□□□ -2.07
TPM1P09493 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.1□□□□□ -2.07
TPM1P09493 MRPS17P9-201ENST00000511924 393 ntBASIC2.1□□□□□ -2.07
TPM1P09493 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TPM1P09493 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.1□□□□□ -2.07
TPM1P09493 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.1□□□□□ -2.07
TPM1P09493 HIGD1AP17-201ENST00000554576 276 ntBASIC2.1□□□□□ -2.07
TPM1P09493 AC021739.1-201ENST00000559631 174 ntBASIC2.1□□□□□ -2.07
TPM1P09493 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.1□□□□□ -2.07
TPM1P09493 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.1□□□□□ -2.07
TPM1P09493 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.1□□□□□ -2.07
TPM1P09493 AL138963.2-201ENST00000605137 226 ntBASIC2.1□□□□□ -2.07
TPM1P09493 AL160281.1-201ENST00000605307 311 ntBASIC2.1□□□□□ -2.07
TPM1P09493 AP005229.2-201ENST00000609980 697 ntBASIC2.1□□□□□ -2.07
TPM1P09493 AC107075.1-201ENST00000613695 314 ntBASIC2.1□□□□□ -2.07
TPM1P09493 AL445264.1-201ENST00000621719 171 ntBASIC2.1□□□□□ -2.07
TPM1P09493 AC244517.12-201ENST00000623581 663 ntBASIC2.1□□□□□ -2.07
TPM1P09493 AC093875.1-201ENST00000623688 504 ntBASIC2.1□□□□□ -2.07
TPM1P09493 AC019226.1-201ENST00000625666 515 ntBASIC2.1□□□□□ -2.07
TPM1P09493 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TPM1P09493 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TPM1P09493 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.1□□□□□ -2.07
TPM1P09493 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.09□□□□□ -2.07
TPM1P09493 RPS24P7-201ENST00000416921 246 ntBASIC2.09□□□□□ -2.07
TPM1P09493 BX119904.4-201ENST00000424402 301 ntBASIC2.09□□□□□ -2.07
TPM1P09493 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.09□□□□□ -2.07
TPM1P09493 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.09□□□□□ -2.07
TPM1P09493 ARPC3P5-201ENST00000448802 534 ntBASIC2.09□□□□□ -2.07
TPM1P09493 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.09□□□□□ -2.07
TPM1P09493 AC244505.3-201ENST00000454598 187 ntBASIC2.09□□□□□ -2.07
TPM1P09493 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.09□□□□□ -2.07
TPM1P09493 HMGB3P17-201ENST00000504195 649 ntBASIC2.09□□□□□ -2.07
TPM1P09493 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.09□□□□□ -2.07
TPM1P09493 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.09□□□□□ -2.07
TPM1P09493 AC012435.1-202ENST00000568772 240 ntBASIC2.09□□□□□ -2.07
TPM1P09493 MIR3126-201ENST00000577443 74 ntBASIC2.09□□□□□ -2.07
TPM1P09493 AC024614.2-201ENST00000577584 372 ntBASIC2.09□□□□□ -2.07
TPM1P09493 AC091152.3-201ENST00000604227 325 ntBASIC2.09□□□□□ -2.07
TPM1P09493 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.09□□□□□ -2.07
TPM1P09493 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
TPM1P09493 AC109454.4-201ENST00000623411 649 ntBASIC2.09□□□□□ -2.07
TPM1P09493 MIR219B-201ENST00000637023 88 ntBASIC2.09□□□□□ -2.07
TPM1P09493 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.09□□□□□ -2.08
TPM1P09493 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
TPM1P09493 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
TPM1P09493 RNU6-1159P-201ENST00000362933 107 ntBASIC2.08□□□□□ -2.08
TPM1P09493 Y_RNA.245-201ENST00000364493 95 ntBASIC2.08□□□□□ -2.08
TPM1P09493 RNU6-343P-201ENST00000364709 104 ntBASIC2.08□□□□□ -2.08
TPM1P09493 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.08□□□□□ -2.08
TPM1P09493 GSTA9P-201ENST00000406231 611 ntBASIC2.08□□□□□ -2.08
TPM1P09493 RNU6-516P-201ENST00000411381 104 ntBASIC2.08□□□□□ -2.08
TPM1P09493 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.08□□□□□ -2.08
TPM1P09493 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.08□□□□□ -2.08
TPM1P09493 MTND1P28-201ENST00000435623 950 ntBASIC2.08□□□□□ -2.08
TPM1P09493 MTND4P6-201ENST00000438297 472 ntBASIC2.08□□□□□ -2.08
TPM1P09493 HMGN2P10-201ENST00000448085 265 ntBASIC2.08□□□□□ -2.08
TPM1P09493 AL500527.1-201ENST00000448532 255 ntBASIC2.08□□□□□ -2.08
TPM1P09493 HMGN1P5-201ENST00000448591 263 ntBASIC2.08□□□□□ -2.08
TPM1P09493 AC079776.3-201ENST00000450665 370 ntBASIC2.08□□□□□ -2.08
TPM1P09493 AC013267.1-201ENST00000458227 267 ntBASIC2.08□□□□□ -2.08
TPM1P09493 RPL31P50-201ENST00000471002 296 ntBASIC2.08□□□□□ -2.08
TPM1P09493 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.08□□□□□ -2.08
TPM1P09493 AC026414.1-201ENST00000504046 698 ntBASIC2.08□□□□□ -2.08
TPM1P09493 RNU1-103P-201ENST00000516502 125 ntBASIC2.08□□□□□ -2.08
TPM1P09493 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.08□□□□□ -2.08
TPM1P09493 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.08□□□□□ -2.08
TPM1P09493 AP003497.1-201ENST00000528472 562 ntBASIC2.08□□□□□ -2.08
TPM1P09493 SLC2A13P1-201ENST00000531560 322 ntBASIC2.08□□□□□ -2.08
TPM1P09493 MTCO2P15-201ENST00000532655 656 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms