Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC112673.1-201ENST00000513168 575 ntBASIC2.41□□□□□ -2.02
RETP07949 RNU6-798P-201ENST00000516912 103 ntBASIC2.41□□□□□ -2.02
RETP07949 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.41□□□□□ -2.02
RETP07949 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.41□□□□□ -2.02
RETP07949 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
RETP07949 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.41□□□□□ -2.02
RETP07949 DUXAP1-201ENST00000556632 463 ntBASIC2.41□□□□□ -2.02
RETP07949 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.41□□□□□ -2.02
RETP07949 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.41□□□□□ -2.02
RETP07949 MIR3609-201ENST00000582661 80 ntBASIC2.41□□□□□ -2.02
RETP07949 VN1R82P-201ENST00000601481 356 ntBASIC2.41□□□□□ -2.02
RETP07949 AP001429.1-201ENST00000602568 530 ntBASIC2.41□□□□□ -2.02
RETP07949 AC103810.6-201ENST00000606708 136 ntBASIC2.41□□□□□ -2.02
RETP07949 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.41□□□□□ -2.02
RETP07949 TUSC7.1-201ENST00000610969 165 ntBASIC2.41□□□□□ -2.02
RETP07949 AC021755.4-201ENST00000616620 456 ntBASIC2.41□□□□□ -2.02
RETP07949 AL596245.1-201ENST00000618994 362 ntBASIC2.41□□□□□ -2.02
RETP07949 MIR7111-201ENST00000619751 72 ntBASIC2.41□□□□□ -2.02
RETP07949 AC092881.1-201ENST00000638218 2733 ntBASIC2.41□□□□□ -2.02
RETP07949 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RETP07949 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RETP07949 AC008568.2-201ENST00000623862 2313 ntBASIC2.41□□□□□ -2.02
RETP07949 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
RETP07949 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RETP07949 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.4□□□□□ -2.02
RETP07949 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.4□□□□□ -2.02
RETP07949 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
RETP07949 Y_RNA.234-201ENST00000364409 97 ntBASIC2.4□□□□□ -2.03
RETP07949 RNU1-52P-201ENST00000384190 164 ntBASIC2.4□□□□□ -2.03
RETP07949 MIR325-201ENST00000385260 98 ntBASIC2.4□□□□□ -2.03
RETP07949 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.4□□□□□ -2.03
RETP07949 MTCO2P5-201ENST00000422621 426 ntBASIC2.4□□□□□ -2.03
RETP07949 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.4□□□□□ -2.03
RETP07949 MTND1P32-201ENST00000433043 938 ntBASIC2.4□□□□□ -2.03
RETP07949 RPS25P9-201ENST00000435591 252 ntBASIC2.4□□□□□ -2.03
RETP07949 AL445687.1-201ENST00000439946 251 ntBASIC2.4□□□□□ -2.03
RETP07949 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.4□□□□□ -2.03
RETP07949 EEF1E1P1-201ENST00000446998 430 ntBASIC2.4□□□□□ -2.03
RETP07949 MTND1P31-201ENST00000449206 961 ntBASIC2.4□□□□□ -2.03
RETP07949 ANKRD26P4-201ENST00000455755 950 ntBASIC2.4□□□□□ -2.03
RETP07949 AL049714.1-201ENST00000466686 347 ntBASIC2.4□□□□□ -2.03
RETP07949 AC068587.2-201ENST00000478386 781 ntBASIC2.4□□□□□ -2.03
RETP07949 RPL23AP49-201ENST00000492925 468 ntBASIC2.4□□□□□ -2.03
RETP07949 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.4□□□□□ -2.03
RETP07949 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.4□□□□□ -2.03
RETP07949 RNU6-528P-201ENST00000516926 100 ntBASIC2.4□□□□□ -2.03
RETP07949 Y_RNA.717-201ENST00000517106 92 ntBASIC2.4□□□□□ -2.03
RETP07949 SNORA31.22-201ENST00000517204 135 ntBASIC2.4□□□□□ -2.03
RETP07949 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.4□□□□□ -2.03
RETP07949 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.4□□□□□ -2.03
RETP07949 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.4□□□□□ -2.03
RETP07949 SNRPGP18-201ENST00000553000 214 ntBASIC2.4□□□□□ -2.03
RETP07949 AL354943.1-201ENST00000572103 781 ntBASIC2.4□□□□□ -2.03
RETP07949 MIR3921-201ENST00000577308 85 ntBASIC2.4□□□□□ -2.03
RETP07949 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.4□□□□□ -2.03
RETP07949 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.4□□□□□ -2.03
RETP07949 AC004987.4-201ENST00000603383 338 ntBASIC2.4□□□□□ -2.03
RETP07949 AL592221.1-201ENST00000605266 382 ntBASIC2.4□□□□□ -2.03
RETP07949 AC004067.1-201ENST00000608733 700 ntBASIC2.4□□□□□ -2.03
RETP07949 AC046143.2-201ENST00000609789 160 ntBASIC2.4□□□□□ -2.03
RETP07949 AC245297.2-201ENST00000610119 565 ntBASIC2.4□□□□□ -2.03
RETP07949 AC087683.2-201ENST00000611384 326 ntBASIC2.4□□□□□ -2.03
RETP07949 AC090132.2-201ENST00000615881 347 ntBASIC2.4□□□□□ -2.03
RETP07949 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.4□□□□□ -2.03
RETP07949 AL079343.1-201ENST00000572358 1771 ntBASIC2.4□□□□□ -2.03
RETP07949 AL356473.1-201ENST00000406203 1408 ntBASIC2.4□□□□□ -2.03
RETP07949 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
RETP07949 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RETP07949 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
RETP07949 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
RETP07949 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RETP07949 AL161781.1-201ENST00000354277 403 ntBASIC2.39□□□□□ -2.03
RETP07949 SNORD113-6-201ENST00000363345 75 ntBASIC2.39□□□□□ -2.03
RETP07949 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
RETP07949 HMGB1P17-201ENST00000403495 628 ntBASIC2.39□□□□□ -2.03
RETP07949 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.39□□□□□ -2.03
RETP07949 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.39□□□□□ -2.03
RETP07949 AC234781.2-201ENST00000426370 994 ntBASIC2.39□□□□□ -2.03
RETP07949 AC090774.1-201ENST00000435925 246 ntBASIC2.39□□□□□ -2.03
RETP07949 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.39□□□□□ -2.03
RETP07949 MTND5P14-201ENST00000441481 1267 ntBASIC2.39□□□□□ -2.03
RETP07949 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.39□□□□□ -2.03
RETP07949 MTND2P14-201ENST00000482139 351 ntBASIC2.39□□□□□ -2.03
RETP07949 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RETP07949 AL359273.1-201ENST00000510918 627 ntBASIC2.39□□□□□ -2.03
RETP07949 AC022483.1-201ENST00000514020 567 ntBASIC2.39□□□□□ -2.03
RETP07949 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.39□□□□□ -2.03
RETP07949 RNU6-714P-201ENST00000516963 103 ntBASIC2.39□□□□□ -2.03
RETP07949 SNORA31.18-201ENST00000517043 134 ntBASIC2.39□□□□□ -2.03
RETP07949 AC105185.1-201ENST00000518705 535 ntBASIC2.39□□□□□ -2.03
RETP07949 DEFB131D-201ENST00000526803 184 ntBASIC2.39□□□□□ -2.03
RETP07949 AC023538.1-201ENST00000534576 736 ntBASIC2.39□□□□□ -2.03
RETP07949 OR6C7P-201ENST00000547875 934 ntBASIC2.39□□□□□ -2.03
RETP07949 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.39□□□□□ -2.03
RETP07949 CYCSP2-201ENST00000558168 301 ntBASIC2.39□□□□□ -2.03
RETP07949 AL158211.1-201ENST00000566763 763 ntBASIC2.39□□□□□ -2.03
RETP07949 ISCA1P3-201ENST00000577104 373 ntBASIC2.39□□□□□ -2.03
RETP07949 AC090615.1-201ENST00000577519 154 ntBASIC2.39□□□□□ -2.03
RETP07949 OR1M4P-201ENST00000589199 287 ntBASIC2.39□□□□□ -2.03
RETP07949 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms