Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC068831.7-201ENST00000616954 363 ntBASIC0.8□□□□□ -2.28
SPTA1P02549 uc_338.9-201ENST00000617424 182 ntBASIC0.8□□□□□ -2.28
SPTA1P02549 AC091304.6-201ENST00000619761 202 ntBASIC0.8□□□□□ -2.28
SPTA1P02549 ZNF519P1-201ENST00000449011 1626 ntBASIC0.8□□□□□ -2.28
SPTA1P02549 AC092745.2-202ENST00000411880 369 ntBASIC0.79□□□□□ -2.28
SPTA1P02549 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.79□□□□□ -2.28
SPTA1P02549 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
SPTA1P02549 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.79□□□□□ -2.28
SPTA1P02549 CBX3P7-201ENST00000532876 502 ntBASIC0.79□□□□□ -2.28
SPTA1P02549 AC022662.1-201ENST00000580252 331 ntBASIC0.79□□□□□ -2.28
SPTA1P02549 AC106791.2-201ENST00000604680 391 ntBASIC0.79□□□□□ -2.28
SPTA1P02549 FAM157A-202ENST00000615155 405 ntBASIC0.79□□□□□ -2.28
SPTA1P02549 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.79□□□□□ -2.28
SPTA1P02549 MTND4P27-201ENST00000450813 1354 ntBASIC0.79□□□□□ -2.28
SPTA1P02549 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
SPTA1P02549 SNORA2A-201ENST00000383885 135 ntBASIC0.79□□□□□ -2.28
SPTA1P02549 OR6C66P-201ENST00000414917 930 ntBASIC0.79□□□□□ -2.28
SPTA1P02549 AC019070.1-201ENST00000415008 1024 ntBASIC0.79□□□□□ -2.28
SPTA1P02549 SDAD1P3-201ENST00000427380 333 ntBASIC0.79□□□□□ -2.28
SPTA1P02549 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.79□□□□□ -2.28
SPTA1P02549 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
SPTA1P02549 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.79□□□□□ -2.28
SPTA1P02549 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.79□□□□□ -2.28
SPTA1P02549 AC069304.3-201ENST00000603938 1084 ntBASIC0.79□□□□□ -2.28
SPTA1P02549 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
SPTA1P02549 RNU1-23P-201ENST00000363361 144 ntBASIC0.78□□□□□ -2.28
SPTA1P02549 XKRYP1-201ENST00000423438 492 ntBASIC0.78□□□□□ -2.28
SPTA1P02549 XKRYP2-201ENST00000432915 492 ntBASIC0.78□□□□□ -2.28
SPTA1P02549 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.78□□□□□ -2.28
SPTA1P02549 AL513343.1-201ENST00000451818 792 ntBASIC0.78□□□□□ -2.28
SPTA1P02549 RNU1-98P-201ENST00000458992 160 ntBASIC0.78□□□□□ -2.28
SPTA1P02549 RPS20P20-201ENST00000460498 340 ntBASIC0.78□□□□□ -2.28
SPTA1P02549 RPL21P104-201ENST00000464143 478 ntBASIC0.78□□□□□ -2.28
SPTA1P02549 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC0.78□□□□□ -2.28
SPTA1P02549 OR5BM1P-201ENST00000512021 366 ntBASIC0.78□□□□□ -2.28
SPTA1P02549 RNU6-1073P-201ENST00000517182 106 ntBASIC0.78□□□□□ -2.28
SPTA1P02549 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC0.78□□□□□ -2.28
SPTA1P02549 SNRPGP16-201ENST00000533275 226 ntBASIC0.78□□□□□ -2.28
SPTA1P02549 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.78□□□□□ -2.28
SPTA1P02549 AC020923.1-201ENST00000624021 917 ntBASIC0.78□□□□□ -2.28
SPTA1P02549 Z69720.2-201ENST00000624755 279 ntBASIC0.78□□□□□ -2.28
SPTA1P02549 AP001350.1-201ENST00000601906 1524 ntBASIC0.78□□□□□ -2.28
SPTA1P02549 MIR320B1-201ENST00000390209 79 ntBASIC0.78□□□□□ -2.28
SPTA1P02549 HMGB1P9-201ENST00000429856 646 ntBASIC0.78□□□□□ -2.28
SPTA1P02549 MTCYBP29-201ENST00000436327 1006 ntBASIC0.78□□□□□ -2.28
SPTA1P02549 RPL31P58-201ENST00000469001 379 ntBASIC0.78□□□□□ -2.28
SPTA1P02549 MIR4658-201ENST00000584344 65 ntBASIC0.78□□□□□ -2.28
SPTA1P02549 HAUS6P2-201ENST00000433254 2404 ntBASIC0.77□□□□□ -2.29
SPTA1P02549 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.77□□□□□ -2.29
SPTA1P02549 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC0.77□□□□□ -2.29
SPTA1P02549 RNU6-185P-201ENST00000384421 107 ntBASIC0.77□□□□□ -2.29
SPTA1P02549 MIR767-201ENST00000390228 109 ntBASIC0.77□□□□□ -2.29
SPTA1P02549 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.77□□□□□ -2.29
SPTA1P02549 MTND5P25-201ENST00000430499 799 ntBASIC0.77□□□□□ -2.29
SPTA1P02549 RNU7-27P-201ENST00000459281 62 ntBASIC0.77□□□□□ -2.29
SPTA1P02549 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC0.77□□□□□ -2.29
SPTA1P02549 PABPC1P3-201ENST00000469174 459 ntBASIC0.77□□□□□ -2.29
SPTA1P02549 SCARNA1-201ENST00000517138 166 ntBASIC0.77□□□□□ -2.29
SPTA1P02549 BTF3P12-201ENST00000519620 469 ntBASIC0.77□□□□□ -2.29
SPTA1P02549 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SPTA1P02549 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.77□□□□□ -2.29
SPTA1P02549 Y_RNA.48-201ENST00000362710 103 ntBASIC0.77□□□□□ -2.29
SPTA1P02549 U8.3-201ENST00000363321 132 ntBASIC0.77□□□□□ -2.29
SPTA1P02549 RNU6-1077P-201ENST00000410506 102 ntBASIC0.77□□□□□ -2.29
SPTA1P02549 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.77□□□□□ -2.29
SPTA1P02549 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.77□□□□□ -2.29
SPTA1P02549 RPS26P56-201ENST00000444468 240 ntBASIC0.77□□□□□ -2.29
SPTA1P02549 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC0.77□□□□□ -2.29
SPTA1P02549 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.77□□□□□ -2.29
SPTA1P02549 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.77□□□□□ -2.29
SPTA1P02549 RN7SKP277-201ENST00000516895 283 ntBASIC0.77□□□□□ -2.29
SPTA1P02549 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.77□□□□□ -2.29
SPTA1P02549 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.77□□□□□ -2.29
SPTA1P02549 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.77□□□□□ -2.29
SPTA1P02549 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.77□□□□□ -2.29
SPTA1P02549 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.77□□□□□ -2.29
SPTA1P02549 RNU6-1331P-201ENST00000363658 106 ntBASIC0.76□□□□□ -2.29
SPTA1P02549 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
SPTA1P02549 RNA5SP193-201ENST00000410353 107 ntBASIC0.76□□□□□ -2.29
SPTA1P02549 AL356379.1-201ENST00000414105 126 ntBASIC0.76□□□□□ -2.29
SPTA1P02549 AC092648.1-201ENST00000425870 423 ntBASIC0.76□□□□□ -2.29
SPTA1P02549 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.76□□□□□ -2.29
SPTA1P02549 RPL17P49-201ENST00000443728 411 ntBASIC0.76□□□□□ -2.29
SPTA1P02549 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.76□□□□□ -2.29
SPTA1P02549 AC022880.1-201ENST00000534017 973 ntBASIC0.76□□□□□ -2.29
SPTA1P02549 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC0.76□□□□□ -2.29
SPTA1P02549 AL391261.3-201ENST00000557194 520 ntBASIC0.76□□□□□ -2.29
SPTA1P02549 MIR4653-201ENST00000585107 83 ntBASIC0.76□□□□□ -2.29
SPTA1P02549 AL355297.2-201ENST00000604792 129 ntBASIC0.76□□□□□ -2.29
SPTA1P02549 RNU6-1197P-201ENST00000391183 107 ntBASIC0.76□□□□□ -2.29
SPTA1P02549 AL355497.1-201ENST00000406262 551 ntBASIC0.76□□□□□ -2.29
SPTA1P02549 RPL21P66-201ENST00000426566 466 ntBASIC0.76□□□□□ -2.29
SPTA1P02549 AC093716.1-201ENST00000435923 377 ntBASIC0.76□□□□□ -2.29
SPTA1P02549 AL353689.1-201ENST00000438895 199 ntBASIC0.76□□□□□ -2.29
SPTA1P02549 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.76□□□□□ -2.29
SPTA1P02549 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.76□□□□□ -2.29
SPTA1P02549 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.76□□□□□ -2.29
SPTA1P02549 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.76□□□□□ -2.29
SPTA1P02549 HMGB3P17-201ENST00000504195 649 ntBASIC0.76□□□□□ -2.29
SPTA1P02549 DEFB108E-201ENST00000524692 240 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms