Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CLDN9O95484 RNA5SP393-201ENST00000363423 117 ntBASIC2.36□□□□□ -2.03
CLDN9O95484 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CLDN9O95484 MTCO2P8-201ENST00000412213 658 ntBASIC2.36□□□□□ -2.03
CLDN9O95484 SUMO1P4-201ENST00000429430 302 ntBASIC2.36□□□□□ -2.03
CLDN9O95484 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.36□□□□□ -2.03
CLDN9O95484 MTND1P28-201ENST00000435623 950 ntBASIC2.36□□□□□ -2.03
CLDN9O95484 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.36□□□□□ -2.03
CLDN9O95484 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.36□□□□□ -2.03
CLDN9O95484 HMGB1P18-201ENST00000438801 619 ntBASIC2.36□□□□□ -2.03
CLDN9O95484 AL445687.1-201ENST00000439946 251 ntBASIC2.36□□□□□ -2.03
CLDN9O95484 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.36□□□□□ -2.03
CLDN9O95484 AL109933.2-201ENST00000452651 260 ntBASIC2.36□□□□□ -2.03
CLDN9O95484 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.36□□□□□ -2.03
CLDN9O95484 RPS27AP10-201ENST00000496103 208 ntBASIC2.36□□□□□ -2.03
CLDN9O95484 AC091951.3-201ENST00000504093 246 ntBASIC2.36□□□□□ -2.03
CLDN9O95484 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.36□□□□□ -2.03
CLDN9O95484 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CLDN9O95484 AC013828.2-201ENST00000532487 235 ntBASIC2.36□□□□□ -2.03
CLDN9O95484 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.36□□□□□ -2.03
CLDN9O95484 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.36□□□□□ -2.03
CLDN9O95484 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.36□□□□□ -2.03
CLDN9O95484 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CLDN9O95484 AC012150.2-201ENST00000621300 544 ntBASIC2.36□□□□□ -2.03
CLDN9O95484 AC010149.2-201ENST00000637608 315 ntBASIC2.36□□□□□ -2.03
CLDN9O95484 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.36□□□□□ -2.03
CLDN9O95484 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CLDN9O95484 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
CLDN9O95484 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CLDN9O95484 RPL21P132-201ENST00000331267 462 ntBASIC2.35□□□□□ -2.03
CLDN9O95484 RNU6-1167P-201ENST00000363227 94 ntBASIC2.35□□□□□ -2.03
CLDN9O95484 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.35□□□□□ -2.03
CLDN9O95484 RNU6-750P-201ENST00000390946 107 ntBASIC2.35□□□□□ -2.03
CLDN9O95484 MIR1305-201ENST00000408300 86 ntBASIC2.35□□□□□ -2.03
CLDN9O95484 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.35□□□□□ -2.03
CLDN9O95484 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.35□□□□□ -2.03
CLDN9O95484 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.35□□□□□ -2.03
CLDN9O95484 ELOCP14-201ENST00000428070 331 ntBASIC2.35□□□□□ -2.03
CLDN9O95484 SRIP2-201ENST00000428470 166 ntBASIC2.35□□□□□ -2.03
CLDN9O95484 MED14P1-201ENST00000430517 648 ntBASIC2.35□□□□□ -2.03
CLDN9O95484 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.35□□□□□ -2.03
CLDN9O95484 ELOCP7-201ENST00000439968 331 ntBASIC2.35□□□□□ -2.03
CLDN9O95484 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.35□□□□□ -2.03
CLDN9O95484 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.35□□□□□ -2.03
CLDN9O95484 FDX1P2-201ENST00000450769 375 ntBASIC2.35□□□□□ -2.03
CLDN9O95484 DUXAP8-207ENST00000456786 622 ntBASIC2.35□□□□□ -2.03
CLDN9O95484 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.35□□□□□ -2.03
CLDN9O95484 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
CLDN9O95484 AC098591.2-201ENST00000510152 315 ntBASIC2.35□□□□□ -2.03
CLDN9O95484 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
CLDN9O95484 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.35□□□□□ -2.03
CLDN9O95484 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.35□□□□□ -2.03
CLDN9O95484 AC007349.4-201ENST00000608114 532 ntBASIC2.35□□□□□ -2.03
CLDN9O95484 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.35□□□□□ -2.03
CLDN9O95484 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.35□□□□□ -2.03
CLDN9O95484 MIR7843-201ENST00000622274 79 ntBASIC2.35□□□□□ -2.03
CLDN9O95484 AP003485.2-201ENST00000623636 610 ntBASIC2.35□□□□□ -2.03
CLDN9O95484 IGHVIII-44-202ENST00000636235 289 ntBASIC2.35□□□□□ -2.03
CLDN9O95484 AC135776.4-201ENST00000624300 1904 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CLDN9O95484 AP006437.1-201ENST00000641440 3685 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 MTND5P29-201ENST00000458676 1807 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
CLDN9O95484 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CLDN9O95484 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CLDN9O95484 RNU6-433P-201ENST00000363216 104 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 AL359511.1-201ENST00000402970 211 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 AL359634.1-202ENST00000404721 284 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 RNA5SP508-201ENST00000411327 119 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 RPL17P12-201ENST00000413391 526 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.34□□□□□ -2.03
CLDN9O95484 AC106883.1-201ENST00000418805 562 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 BPY2DP-201ENST00000422208 265 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 NUP35P1-201ENST00000422734 947 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CLDN9O95484 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.34□□□□□ -2.03
CLDN9O95484 HSFY7P-201ENST00000432672 318 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.34□□□□□ -2.03
CLDN9O95484 HSFY8P-201ENST00000437934 318 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 AC005094.1-201ENST00000440420 368 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.34□□□□□ -2.03
CLDN9O95484 HSFY5P-201ENST00000453726 309 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 RPL37P6-201ENST00000460682 294 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.34□□□□□ -2.03
CLDN9O95484 AC090096.1-201ENST00000489168 390 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 AC104685.1-201ENST00000502445 371 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.34□□□□□ -2.03
CLDN9O95484 Y_RNA.676-201ENST00000516393 96 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 RNU6-64P-201ENST00000517119 105 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 RNA5SP165-201ENST00000517142 115 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 AC105185.1-201ENST00000518705 535 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.34□□□□□ -2.03
CLDN9O95484 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.34□□□□□ -2.03
CLDN9O95484 AP000907.2-201ENST00000530827 353 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 DUXAP1-201ENST00000556632 463 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 AC136618.2-201ENST00000575091 400 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 MIR4524B-201ENST00000581569 115 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 MIR544B-201ENST00000582372 78 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms