Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 DUSP12P1-201ENST00000612874 516 ntBASIC3.17□□□□□ -1.9
BEST1O76090 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
BEST1O76090 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
BEST1O76090 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
BEST1O76090 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
BEST1O76090 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
BEST1O76090 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.16□□□□□ -1.9
BEST1O76090 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
BEST1O76090 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.16□□□□□ -1.9
BEST1O76090 AC073343.1-201ENST00000328239 651 ntBASIC3.16□□□□□ -1.9
BEST1O76090 RNA5SP383-201ENST00000362934 120 ntBASIC3.16□□□□□ -1.9
BEST1O76090 U3.4-201ENST00000363352 213 ntBASIC3.16□□□□□ -1.9
BEST1O76090 U3.6-201ENST00000363622 211 ntBASIC3.16□□□□□ -1.9
BEST1O76090 SMIM11P1-201ENST00000369586 178 ntBASIC3.16□□□□□ -1.9
BEST1O76090 MIR767-201ENST00000390228 109 ntBASIC3.16□□□□□ -1.9
BEST1O76090 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.16□□□□□ -1.9
BEST1O76090 ELOCP4-201ENST00000420090 333 ntBASIC3.16□□□□□ -1.9
BEST1O76090 OR2AS1P-201ENST00000427827 319 ntBASIC3.16□□□□□ -1.9
BEST1O76090 HMGB1P9-201ENST00000429856 646 ntBASIC3.16□□□□□ -1.9
BEST1O76090 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.16□□□□□ -1.9
BEST1O76090 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.16□□□□□ -1.9
BEST1O76090 SNORD42A-201ENST00000459584 64 ntBASIC3.16□□□□□ -1.9
BEST1O76090 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.16□□□□□ -1.9
BEST1O76090 RN7SKP272-201ENST00000516988 232 ntBASIC3.16□□□□□ -1.9
BEST1O76090 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.16□□□□□ -1.9
BEST1O76090 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.16□□□□□ -1.9
BEST1O76090 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
BEST1O76090 NACAP3-201ENST00000552100 481 ntBASIC3.16□□□□□ -1.9
BEST1O76090 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.16□□□□□ -1.9
BEST1O76090 AC010653.1-201ENST00000571108 881 ntBASIC3.16□□□□□ -1.9
BEST1O76090 AC005771.1-201ENST00000585581 349 ntBASIC3.16□□□□□ -1.9
BEST1O76090 HMGN2P15-201ENST00000585707 270 ntBASIC3.16□□□□□ -1.9
BEST1O76090 AC005498.1-201ENST00000592125 465 ntBASIC3.16□□□□□ -1.9
BEST1O76090 AC008250.2-201ENST00000615261 205 ntBASIC3.16□□□□□ -1.9
BEST1O76090 AP001506.1-201ENST00000615444 211 ntBASIC3.16□□□□□ -1.9
BEST1O76090 MTND5P42-201ENST00000637720 498 ntBASIC3.16□□□□□ -1.9
BEST1O76090 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
BEST1O76090 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
BEST1O76090 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.16□□□□□ -1.9
BEST1O76090 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
BEST1O76090 ZNF519P1-201ENST00000449011 1626 ntBASIC3.15□□□□□ -1.9
BEST1O76090 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
BEST1O76090 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
BEST1O76090 RNY1P12-201ENST00000364251 105 ntBASIC3.15□□□□□ -1.91
BEST1O76090 SNORA40.3-201ENST00000390964 122 ntBASIC3.15□□□□□ -1.91
BEST1O76090 UBA52P6-201ENST00000399822 382 ntBASIC3.15□□□□□ -1.91
BEST1O76090 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
BEST1O76090 AC096664.2-201ENST00000411843 406 ntBASIC3.15□□□□□ -1.91
BEST1O76090 RPS12P24-201ENST00000412619 387 ntBASIC3.15□□□□□ -1.91
BEST1O76090 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.15□□□□□ -1.91
BEST1O76090 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.15□□□□□ -1.91
BEST1O76090 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.15□□□□□ -1.91
BEST1O76090 RPL36AP53-201ENST00000432891 316 ntBASIC3.15□□□□□ -1.91
BEST1O76090 RPL23AP58-201ENST00000440453 469 ntBASIC3.15□□□□□ -1.91
BEST1O76090 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.15□□□□□ -1.91
BEST1O76090 AC093392.2-201ENST00000450682 337 ntBASIC3.15□□□□□ -1.91
BEST1O76090 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.15□□□□□ -1.91
BEST1O76090 RPL36AP51-201ENST00000487216 318 ntBASIC3.15□□□□□ -1.91
BEST1O76090 AC026801.1-201ENST00000497178 464 ntBASIC3.15□□□□□ -1.91
BEST1O76090 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.15□□□□□ -1.91
BEST1O76090 RNU6-677P-201ENST00000516914 101 ntBASIC3.15□□□□□ -1.91
BEST1O76090 AC022634.1-201ENST00000520765 532 ntBASIC3.15□□□□□ -1.91
BEST1O76090 AC012414.6-201ENST00000568241 401 ntBASIC3.15□□□□□ -1.91
BEST1O76090 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.15□□□□□ -1.91
BEST1O76090 BNIP3P9-201ENST00000603714 553 ntBASIC3.15□□□□□ -1.91
BEST1O76090 AL355598.1-201ENST00000604169 202 ntBASIC3.15□□□□□ -1.91
BEST1O76090 MTND4LP5-201ENST00000605152 292 ntBASIC3.15□□□□□ -1.91
BEST1O76090 U2.21-201ENST00000637295 81 ntBASIC3.15□□□□□ -1.91
BEST1O76090 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
BEST1O76090 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
BEST1O76090 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
BEST1O76090 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
BEST1O76090 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
BEST1O76090 AL355596.1-201ENST00000565399 3996 ntBASIC3.14□□□□□ -1.91
BEST1O76090 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.14□□□□□ -1.91
BEST1O76090 RNU1-140P-201ENST00000365040 165 ntBASIC3.14□□□□□ -1.91
BEST1O76090 RPS3AP36-201ENST00000398190 775 ntBASIC3.14□□□□□ -1.91
BEST1O76090 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.14□□□□□ -1.91
BEST1O76090 RPL5P18-201ENST00000406671 891 ntBASIC3.14□□□□□ -1.91
BEST1O76090 RPL26P27-201ENST00000414397 437 ntBASIC3.14□□□□□ -1.91
BEST1O76090 AC009518.2-201ENST00000418056 731 ntBASIC3.14□□□□□ -1.91
BEST1O76090 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.14□□□□□ -1.91
BEST1O76090 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.14□□□□□ -1.91
BEST1O76090 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.14□□□□□ -1.91
BEST1O76090 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.14□□□□□ -1.91
BEST1O76090 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.14□□□□□ -1.91
BEST1O76090 AL136380.1-201ENST00000447970 162 ntBASIC3.14□□□□□ -1.91
BEST1O76090 NANOGNBP1-201ENST00000448444 480 ntBASIC3.14□□□□□ -1.91
BEST1O76090 AC009961.3-201ENST00000449832 765 ntBASIC3.14□□□□□ -1.91
BEST1O76090 AC091179.1-201ENST00000461606 579 ntBASIC3.14□□□□□ -1.91
BEST1O76090 SUMO2P6-201ENST00000505273 288 ntBASIC3.14□□□□□ -1.91
BEST1O76090 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.14□□□□□ -1.91
BEST1O76090 HMGB1P41-201ENST00000520234 440 ntBASIC3.14□□□□□ -1.91
BEST1O76090 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.14□□□□□ -1.91
BEST1O76090 AC025281.1-201ENST00000567026 265 ntBASIC3.14□□□□□ -1.91
BEST1O76090 AC008739.2-201ENST00000597006 317 ntBASIC3.14□□□□□ -1.91
BEST1O76090 AL033523.1-201ENST00000605153 153 ntBASIC3.14□□□□□ -1.91
BEST1O76090 AL160281.1-201ENST00000605307 311 ntBASIC3.14□□□□□ -1.91
BEST1O76090 AC131902.3-201ENST00000611767 581 ntBASIC3.14□□□□□ -1.91
BEST1O76090 AC073114.1-201ENST00000612027 490 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms