Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 RNU6-193P-201ENST00000410977 107 ntBASIC3.54□□□□□ -1.84
CNOT3O75175 RNU6-1148P-201ENST00000410992 104 ntBASIC3.54□□□□□ -1.84
CNOT3O75175 OR6C66P-201ENST00000414917 930 ntBASIC3.54□□□□□ -1.84
CNOT3O75175 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.54□□□□□ -1.84
CNOT3O75175 AC093106.2-201ENST00000428212 385 ntBASIC3.54□□□□□ -1.84
CNOT3O75175 SRIP2-201ENST00000428470 166 ntBASIC3.54□□□□□ -1.84
CNOT3O75175 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.54□□□□□ -1.84
CNOT3O75175 CKS1BP5-201ENST00000434172 273 ntBASIC3.54□□□□□ -1.84
CNOT3O75175 AC005094.1-201ENST00000440420 368 ntBASIC3.54□□□□□ -1.84
CNOT3O75175 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.54□□□□□ -1.84
CNOT3O75175 AC016696.1-201ENST00000446949 318 ntBASIC3.54□□□□□ -1.84
CNOT3O75175 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CNOT3O75175 snoU13.22-201ENST00000459428 104 ntBASIC3.54□□□□□ -1.84
CNOT3O75175 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.54□□□□□ -1.84
CNOT3O75175 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.54□□□□□ -1.84
CNOT3O75175 AC084198.1-201ENST00000477747 402 ntBASIC3.54□□□□□ -1.84
CNOT3O75175 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.54□□□□□ -1.84
CNOT3O75175 TRBV12-2-201ENST00000489763 344 ntBASIC3.54□□□□□ -1.84
CNOT3O75175 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CNOT3O75175 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.54□□□□□ -1.84
CNOT3O75175 AC092436.1-201ENST00000506450 503 ntBASIC3.54□□□□□ -1.84
CNOT3O75175 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.54□□□□□ -1.84
CNOT3O75175 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.54□□□□□ -1.84
CNOT3O75175 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.54□□□□□ -1.84
CNOT3O75175 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.54□□□□□ -1.84
CNOT3O75175 AC090877.1-201ENST00000561418 344 ntBASIC3.54□□□□□ -1.84
CNOT3O75175 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.54□□□□□ -1.84
CNOT3O75175 MIR4742-201ENST00000581069 85 ntBASIC3.54□□□□□ -1.84
CNOT3O75175 MIR4775-201ENST00000581168 75 ntBASIC3.54□□□□□ -1.84
CNOT3O75175 MIR3922-201ENST00000585192 84 ntBASIC3.54□□□□□ -1.84
CNOT3O75175 RNU6-89P-201ENST00000606519 100 ntBASIC3.54□□□□□ -1.84
CNOT3O75175 AL050343.2-201ENST00000607338 280 ntBASIC3.54□□□□□ -1.84
CNOT3O75175 AC099778.2-201ENST00000610904 211 ntBASIC3.54□□□□□ -1.84
CNOT3O75175 AL603758.1-201ENST00000618654 241 ntBASIC3.54□□□□□ -1.84
CNOT3O75175 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.54□□□□□ -1.84
CNOT3O75175 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.54□□□□□ -1.84
CNOT3O75175 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CNOT3O75175 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CNOT3O75175 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.53□□□□□ -1.84
CNOT3O75175 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CNOT3O75175 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
CNOT3O75175 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CNOT3O75175 TAB3P1-202ENST00000452645 1634 ntBASIC3.53□□□□□ -1.84
CNOT3O75175 SNORA63-201ENST00000363450 132 ntBASIC3.53□□□□□ -1.84
CNOT3O75175 Y_RNA.184-201ENST00000363884 108 ntBASIC3.53□□□□□ -1.84
CNOT3O75175 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CNOT3O75175 Y_RNA.419-201ENST00000384041 102 ntBASIC3.53□□□□□ -1.84
CNOT3O75175 RNU6-903P-201ENST00000391270 109 ntBASIC3.53□□□□□ -1.84
CNOT3O75175 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CNOT3O75175 AL109755.1-201ENST00000401791 649 ntBASIC3.53□□□□□ -1.84
CNOT3O75175 RNA5SP56-201ENST00000410277 118 ntBASIC3.53□□□□□ -1.84
CNOT3O75175 RNU2-37P-201ENST00000410695 177 ntBASIC3.53□□□□□ -1.84
CNOT3O75175 RPL21P24-201ENST00000413752 448 ntBASIC3.53□□□□□ -1.84
CNOT3O75175 AC233279.1-201ENST00000455300 423 ntBASIC3.53□□□□□ -1.84
CNOT3O75175 HMGB1P25-201ENST00000468402 607 ntBASIC3.53□□□□□ -1.84
CNOT3O75175 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.53□□□□□ -1.84
CNOT3O75175 AC023141.12-201ENST00000512399 199 ntBASIC3.53□□□□□ -1.84
CNOT3O75175 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.53□□□□□ -1.84
CNOT3O75175 AC026801.2-201ENST00000515352 425 ntBASIC3.53□□□□□ -1.84
CNOT3O75175 AC103783.1-201ENST00000520506 373 ntBASIC3.53□□□□□ -1.84
CNOT3O75175 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.53□□□□□ -1.84
CNOT3O75175 AP004242.1-201ENST00000533701 349 ntBASIC3.53□□□□□ -1.84
CNOT3O75175 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.53□□□□□ -1.84
CNOT3O75175 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.53□□□□□ -1.84
CNOT3O75175 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.53□□□□□ -1.84
CNOT3O75175 AC008739.3-201ENST00000603262 127 ntBASIC3.53□□□□□ -1.84
CNOT3O75175 AC069200.1-201ENST00000609511 323 ntBASIC3.53□□□□□ -1.84
CNOT3O75175 AC025034.2-201ENST00000623264 286 ntBASIC3.53□□□□□ -1.84
CNOT3O75175 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.53□□□□□ -1.84
CNOT3O75175 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CNOT3O75175 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CNOT3O75175 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CNOT3O75175 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.53□□□□□ -1.84
CNOT3O75175 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.53□□□□□ -1.84
CNOT3O75175 AC004972.1-201ENST00000623934 2209 ntBASIC3.52□□□□□ -1.85
CNOT3O75175 GABPAP-201ENST00000419271 1356 ntBASIC3.52□□□□□ -1.85
CNOT3O75175 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CNOT3O75175 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CNOT3O75175 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.52□□□□□ -1.85
CNOT3O75175 AL133383.2-201ENST00000622958 2336 ntBASIC3.52□□□□□ -1.85
CNOT3O75175 MIR153-1-201ENST00000384914 90 ntBASIC3.52□□□□□ -1.85
CNOT3O75175 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CNOT3O75175 RNU2-29P-201ENST00000410423 189 ntBASIC3.52□□□□□ -1.85
CNOT3O75175 RNU4-65P-201ENST00000410473 140 ntBASIC3.52□□□□□ -1.85
CNOT3O75175 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.52□□□□□ -1.85
CNOT3O75175 AC114491.1-201ENST00000416095 246 ntBASIC3.52□□□□□ -1.85
CNOT3O75175 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.52□□□□□ -1.85
CNOT3O75175 AL137014.1-201ENST00000420490 1226 ntBASIC3.52□□□□□ -1.85
CNOT3O75175 AC006946.1-201ENST00000429106 328 ntBASIC3.52□□□□□ -1.85
CNOT3O75175 HMGN2P31-201ENST00000432430 273 ntBASIC3.52□□□□□ -1.85
CNOT3O75175 AL590399.6-201ENST00000446396 307 ntBASIC3.52□□□□□ -1.85
CNOT3O75175 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.52□□□□□ -1.85
CNOT3O75175 SNRPFP3-201ENST00000457792 225 ntBASIC3.52□□□□□ -1.85
CNOT3O75175 SNORD97-201ENST00000459187 142 ntBASIC3.52□□□□□ -1.85
CNOT3O75175 RPS27P29-201ENST00000463110 252 ntBASIC3.52□□□□□ -1.85
CNOT3O75175 TTC39CP1-201ENST00000512513 755 ntBASIC3.52□□□□□ -1.85
CNOT3O75175 RNU6-1038P-201ENST00000516516 104 ntBASIC3.52□□□□□ -1.85
CNOT3O75175 RNA5SP164-201ENST00000516533 110 ntBASIC3.52□□□□□ -1.85
CNOT3O75175 RPL7P20-201ENST00000520308 745 ntBASIC3.52□□□□□ -1.85
CNOT3O75175 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms