Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RNU1-41P-201ENST00000516161 162 ntBASIC3.1□□□□□ -1.91
CACNA1FO60840 RNU1-48P-201ENST00000516400 162 ntBASIC3.1□□□□□ -1.91
CACNA1FO60840 MTND4LP18-201ENST00000526864 291 ntBASIC3.1□□□□□ -1.91
CACNA1FO60840 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.1□□□□□ -1.91
CACNA1FO60840 AC090502.2-201ENST00000549267 280 ntBASIC3.1□□□□□ -1.91
CACNA1FO60840 RPL21P5-201ENST00000554662 472 ntBASIC3.1□□□□□ -1.91
CACNA1FO60840 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.1□□□□□ -1.91
CACNA1FO60840 MIR544B-201ENST00000582372 78 ntBASIC3.1□□□□□ -1.91
CACNA1FO60840 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.1□□□□□ -1.91
CACNA1FO60840 AC025034.2-201ENST00000623264 286 ntBASIC3.1□□□□□ -1.91
CACNA1FO60840 AP001148.1-201ENST00000624124 2359 ntBASIC3.1□□□□□ -1.91
CACNA1FO60840 FARSBP1-201ENST00000435808 1778 ntBASIC3.1□□□□□ -1.91
CACNA1FO60840 MTND5P3-201ENST00000438536 1800 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 AL353746.1-201ENST00000566293 6881 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.09□□□□□ -1.91
CACNA1FO60840 Y_RNA.159-201ENST00000363674 87 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 RNU6-115P-201ENST00000364310 107 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 SNORD114-30-201ENST00000364448 72 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 Y_RNA.256-201ENST00000364594 104 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 RNU6-444P-201ENST00000383988 108 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.09□□□□□ -1.91
CACNA1FO60840 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.09□□□□□ -1.91
CACNA1FO60840 TIMM9P3-201ENST00000428659 274 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 SAR1AP4-201ENST00000429225 591 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 AC073614.1-201ENST00000438690 650 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 AC009646.1-201ENST00000510455 318 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CACNA1FO60840 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CACNA1FO60840 AC046134.1-201ENST00000514454 666 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
CACNA1FO60840 RN7SKP277-201ENST00000516895 283 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 AP001893.2-201ENST00000526949 202 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.09□□□□□ -1.91
CACNA1FO60840 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.09□□□□□ -1.91
CACNA1FO60840 AP000790.1-201ENST00000528891 737 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.09□□□□□ -1.91
CACNA1FO60840 AL121579.1-201ENST00000555129 305 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 RPS3AP4-201ENST00000555161 764 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.09□□□□□ -1.91
CACNA1FO60840 AC008752.3-201ENST00000588113 712 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 AL596327.1-201ENST00000603629 213 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 AP000907.4-201ENST00000604143 237 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 AL161729.4-201ENST00000604650 476 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 AC006338.1-201ENST00000618453 749 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 MIR6766-201ENST00000622641 72 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 AC010149.2-201ENST00000637608 315 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 OR5H6-203ENST00000642105 978 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CACNA1FO60840 AP002907.1-201ENST00000606361 1430 ntBASIC3.09□□□□□ -1.91
CACNA1FO60840 MIR6073-201ENST00000352083 89 ntBASIC3.09□□□□□ -1.92
CACNA1FO60840 RNU6-1103P-201ENST00000384150 107 ntBASIC3.09□□□□□ -1.92
CACNA1FO60840 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
CACNA1FO60840 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
CACNA1FO60840 SNORD115-47-201ENST00000391226 86 ntBASIC3.09□□□□□ -1.92
CACNA1FO60840 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.92
CACNA1FO60840 RNU2-37P-201ENST00000410695 177 ntBASIC3.09□□□□□ -1.92
CACNA1FO60840 USP9YP27-201ENST00000418455 438 ntBASIC3.09□□□□□ -1.92
CACNA1FO60840 AC009961.2-201ENST00000435771 251 ntBASIC3.09□□□□□ -1.92
CACNA1FO60840 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.09□□□□□ -1.92
CACNA1FO60840 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.09□□□□□ -1.92
CACNA1FO60840 MTCO3P2-201ENST00000457365 171 ntBASIC3.09□□□□□ -1.92
CACNA1FO60840 AC008571.1-201ENST00000467232 300 ntBASIC3.09□□□□□ -1.92
CACNA1FO60840 AC007182.2-201ENST00000489251 402 ntBASIC3.09□□□□□ -1.92
CACNA1FO60840 AC069439.1-201ENST00000494739 167 ntBASIC3.09□□□□□ -1.92
CACNA1FO60840 FAM92A1P2-202ENST00000504766 877 ntBASIC3.09□□□□□ -1.92
CACNA1FO60840 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.09□□□□□ -1.92
CACNA1FO60840 AC026436.1-201ENST00000510537 270 ntBASIC3.09□□□□□ -1.92
CACNA1FO60840 AP001646.1-201ENST00000527936 915 ntBASIC3.09□□□□□ -1.92
CACNA1FO60840 AC007536.1-201ENST00000533382 349 ntBASIC3.09□□□□□ -1.92
CACNA1FO60840 OR4H12P-201ENST00000556269 907 ntBASIC3.09□□□□□ -1.92
CACNA1FO60840 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.09□□□□□ -1.92
CACNA1FO60840 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.09□□□□□ -1.92
CACNA1FO60840 AC009977.1-201ENST00000586015 570 ntBASIC3.09□□□□□ -1.92
CACNA1FO60840 HMGN1P30-201ENST00000589286 268 ntBASIC3.09□□□□□ -1.92
CACNA1FO60840 AC017083.3-201ENST00000609955 700 ntBASIC3.09□□□□□ -1.92
CACNA1FO60840 AC092794.2-201ENST00000620933 563 ntBASIC3.09□□□□□ -1.92
CACNA1FO60840 IGHVIII-44-202ENST00000636235 289 ntBASIC3.09□□□□□ -1.92
CACNA1FO60840 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.08□□□□□ -1.92
CACNA1FO60840 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
CACNA1FO60840 AC233263.6-201ENST00000631132 1963 ntBASIC3.08□□□□□ -1.92
CACNA1FO60840 AL161781.1-201ENST00000354277 403 ntBASIC3.08□□□□□ -1.92
CACNA1FO60840 SNORA72.1-201ENST00000363485 129 ntBASIC3.08□□□□□ -1.92
CACNA1FO60840 Y_RNA.303-201ENST00000364998 94 ntBASIC3.08□□□□□ -1.92
CACNA1FO60840 SNORA51.6-201ENST00000384151 125 ntBASIC3.08□□□□□ -1.92
CACNA1FO60840 SNORD115.1-201ENST00000391109 76 ntBASIC3.08□□□□□ -1.92
CACNA1FO60840 MIR1277-201ENST00000408536 78 ntBASIC3.08□□□□□ -1.92
CACNA1FO60840 RNA5SP425-201ENST00000410336 112 ntBASIC3.08□□□□□ -1.92
CACNA1FO60840 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.08□□□□□ -1.92
CACNA1FO60840 TPMTP2-201ENST00000414372 726 ntBASIC3.08□□□□□ -1.92
CACNA1FO60840 AL139413.1-201ENST00000421309 217 ntBASIC3.08□□□□□ -1.92
CACNA1FO60840 PIGFP2-201ENST00000421400 651 ntBASIC3.08□□□□□ -1.92
CACNA1FO60840 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.08□□□□□ -1.92
CACNA1FO60840 AL356320.1-201ENST00000429616 163 ntBASIC3.08□□□□□ -1.92
CACNA1FO60840 HMGB1P31-201ENST00000437242 427 ntBASIC3.08□□□□□ -1.92
CACNA1FO60840 AL022238.1-201ENST00000442557 355 ntBASIC3.08□□□□□ -1.92
CACNA1FO60840 AC133134.1-201ENST00000466800 359 ntBASIC3.08□□□□□ -1.92
CACNA1FO60840 AC019235.1-201ENST00000503847 207 ntBASIC3.08□□□□□ -1.92
CACNA1FO60840 EIF5A2P1-201ENST00000564027 460 ntBASIC3.08□□□□□ -1.92
CACNA1FO60840 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms