Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.08□□□□□ -1.92
LMX1BO60663 MIR4795-201ENST00000584182 89 ntBASIC3.08□□□□□ -1.92
LMX1BO60663 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.08□□□□□ -1.92
LMX1BO60663 VN1R80P-201ENST00000597126 338 ntBASIC3.08□□□□□ -1.92
LMX1BO60663 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.08□□□□□ -1.92
LMX1BO60663 RNU6-89P-201ENST00000606519 100 ntBASIC3.08□□□□□ -1.92
LMX1BO60663 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.08□□□□□ -1.92
LMX1BO60663 RMST_8.1-201ENST00000610287 165 ntBASIC3.08□□□□□ -1.92
LMX1BO60663 AC093838.1-201ENST00000613014 469 ntBASIC3.08□□□□□ -1.92
LMX1BO60663 AP001486.3-201ENST00000615334 372 ntBASIC3.08□□□□□ -1.92
LMX1BO60663 U4.6-201ENST00000621618 127 ntBASIC3.08□□□□□ -1.92
LMX1BO60663 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.08□□□□□ -1.92
LMX1BO60663 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LMX1BO60663 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LMX1BO60663 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
LMX1BO60663 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LMX1BO60663 ZNF33CP-201ENST00000432492 2030 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 OTUD4P1-201ENST00000237841 3067 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LMX1BO60663 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
LMX1BO60663 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LMX1BO60663 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
LMX1BO60663 NACAP2-201ENST00000318548 624 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 RNU6-38P-201ENST00000384085 107 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 MIR135A2-201ENST00000384854 100 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
LMX1BO60663 UBE2V1P2-201ENST00000397758 440 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 Y_RNA.615-201ENST00000410769 117 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 RNU6-193P-201ENST00000410977 107 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 RN7SKP53-201ENST00000411337 315 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 EEF1A1P40-201ENST00000412883 573 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 AC114491.1-201ENST00000416095 246 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.07□□□□□ -1.92
LMX1BO60663 RPL7L1P10-201ENST00000427790 463 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 AC017083.1-201ENST00000428093 483 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 PSMA2P3-201ENST00000429685 675 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LMX1BO60663 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.07□□□□□ -1.92
LMX1BO60663 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.07□□□□□ -1.92
LMX1BO60663 AL590399.6-201ENST00000446396 307 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.07□□□□□ -1.92
LMX1BO60663 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.07□□□□□ -1.92
LMX1BO60663 HMGN2P7-201ENST00000456186 273 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 BX510359.1-201ENST00000456973 237 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.07□□□□□ -1.92
LMX1BO60663 RPS29P15-201ENST00000458329 171 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 RNU6-333P-201ENST00000459117 107 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 RPL21P10-201ENST00000463521 490 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LMX1BO60663 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.07□□□□□ -1.92
LMX1BO60663 AC116562.3-201ENST00000506136 177 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 MTCO3P9-201ENST00000506989 781 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LMX1BO60663 RNU6-277P-201ENST00000516272 106 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 MIR2276-201ENST00000516886 89 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.07□□□□□ -1.92
LMX1BO60663 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.07□□□□□ -1.92
LMX1BO60663 FAM60DP-201ENST00000524174 632 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.07□□□□□ -1.92
LMX1BO60663 AC011979.2-201ENST00000527568 352 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 AC068587.5-201ENST00000528506 175 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.07□□□□□ -1.92
LMX1BO60663 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.07□□□□□ -1.92
LMX1BO60663 AC078814.3-201ENST00000553036 491 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 SCOCP1-201ENST00000554676 349 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.07□□□□□ -1.92
LMX1BO60663 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.07□□□□□ -1.92
LMX1BO60663 AL355812.1-201ENST00000603215 216 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 AC009248.2-201ENST00000619826 254 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 MIR3651-201ENST00000630427 90 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LMX1BO60663 MTND4P35-201ENST00000604257 1375 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 MTCO1P24-201ENST00000515438 1558 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 AL645937.1-201ENST00000641739 1652 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
LMX1BO60663 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.07□□□□□ -1.92
LMX1BO60663 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.06□□□□□ -1.92
LMX1BO60663 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.06□□□□□ -1.92
LMX1BO60663 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
LMX1BO60663 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
LMX1BO60663 RNU4-79P-201ENST00000362764 141 ntBASIC3.06□□□□□ -1.92
LMX1BO60663 Y_RNA.167-201ENST00000363735 109 ntBASIC3.06□□□□□ -1.92
LMX1BO60663 RNU6-188P-201ENST00000364207 107 ntBASIC3.06□□□□□ -1.92
LMX1BO60663 SNORA62.1-201ENST00000364287 154 ntBASIC3.06□□□□□ -1.92
LMX1BO60663 RNU6-522P-201ENST00000364497 107 ntBASIC3.06□□□□□ -1.92
LMX1BO60663 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LMX1BO60663 XGY1-201ENST00000381172 446 ntBASIC3.06□□□□□ -1.92
LMX1BO60663 RNU6-278P-201ENST00000390945 109 ntBASIC3.06□□□□□ -1.92
LMX1BO60663 AL122016.1-201ENST00000403365 367 ntBASIC3.06□□□□□ -1.92
LMX1BO60663 RNU2-39P-201ENST00000410604 198 ntBASIC3.06□□□□□ -1.92
LMX1BO60663 RNU4-78P-201ENST00000410940 126 ntBASIC3.06□□□□□ -1.92
LMX1BO60663 RNU6-516P-201ENST00000411381 104 ntBASIC3.06□□□□□ -1.92
LMX1BO60663 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.06□□□□□ -1.92
LMX1BO60663 DUTP6-201ENST00000425573 462 ntBASIC3.06□□□□□ -1.92
LMX1BO60663 USP9YP7-201ENST00000436723 430 ntBASIC3.06□□□□□ -1.92
LMX1BO60663 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.06□□□□□ -1.92
LMX1BO60663 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.06□□□□□ -1.92
LMX1BO60663 RPL23AP33-201ENST00000442301 452 ntBASIC3.06□□□□□ -1.92
LMX1BO60663 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LMX1BO60663 MRPL50P4-201ENST00000446432 475 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms