Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.62□□□□□ -1.99
LCMT2O60294 MIR3605-201ENST00000583214 100 ntBASIC2.62□□□□□ -1.99
LCMT2O60294 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.62□□□□□ -1.99
LCMT2O60294 MIR4293-201ENST00000584305 78 ntBASIC2.62□□□□□ -1.99
LCMT2O60294 MIR548AB-201ENST00000584917 84 ntBASIC2.62□□□□□ -1.99
LCMT2O60294 AP001981.2-201ENST00000603241 418 ntBASIC2.62□□□□□ -1.99
LCMT2O60294 AC025811.1-201ENST00000604312 472 ntBASIC2.62□□□□□ -1.99
LCMT2O60294 AC092354.1-201ENST00000606057 376 ntBASIC2.62□□□□□ -1.99
LCMT2O60294 AL161734.1-201ENST00000609720 557 ntBASIC2.62□□□□□ -1.99
LCMT2O60294 AC245517.5-201ENST00000611529 162 ntBASIC2.62□□□□□ -1.99
LCMT2O60294 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.62□□□□□ -1.99
LCMT2O60294 AC091931.1-201ENST00000623488 728 ntBASIC2.62□□□□□ -1.99
LCMT2O60294 AP003399.1-201ENST00000637534 361 ntBASIC2.62□□□□□ -1.99
LCMT2O60294 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.62□□□□□ -1.99
LCMT2O60294 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.62□□□□□ -1.99
LCMT2O60294 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LCMT2O60294 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
LCMT2O60294 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
LCMT2O60294 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
LCMT2O60294 RNY4P24-201ENST00000362735 96 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 RNU6-223P-201ENST00000362830 107 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 RNU5A-8P-201ENST00000364102 114 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.61□□□□□ -1.99
LCMT2O60294 SNORD116-8-201ENST00000384365 95 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 AL590004.2-201ENST00000404787 371 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 RPL19P1-201ENST00000411635 428 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.61□□□□□ -1.99
LCMT2O60294 RPL21P24-201ENST00000413752 448 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 AL096701.2-201ENST00000416920 238 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.61□□□□□ -1.99
LCMT2O60294 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.61□□□□□ -1.99
LCMT2O60294 GTF2IP20-201ENST00000431663 360 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.61□□□□□ -1.99
LCMT2O60294 TIMM9P1-201ENST00000436122 256 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 AC105272.1-201ENST00000438604 198 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 MTND1P30-201ENST00000441241 901 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.61□□□□□ -1.99
LCMT2O60294 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.61□□□□□ -1.99
LCMT2O60294 COX6CP12-201ENST00000446748 202 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 AL590365.1-201ENST00000450788 243 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 RPS27AP8-201ENST00000452665 445 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 RPL23AP11-201ENST00000475260 469 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.61□□□□□ -1.99
LCMT2O60294 AC103975.1-201ENST00000482506 483 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 MRPS36P2-201ENST00000512569 299 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.61□□□□□ -1.99
LCMT2O60294 RNU6-201P-201ENST00000517100 61 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.61□□□□□ -1.99
LCMT2O60294 AC060788.1-201ENST00000521318 469 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.61□□□□□ -1.99
LCMT2O60294 AC107934.1-201ENST00000522215 217 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
LCMT2O60294 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.61□□□□□ -1.99
LCMT2O60294 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.61□□□□□ -1.99
LCMT2O60294 AC106782.4-201ENST00000568264 210 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 AC138761.3-201ENST00000579993 334 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
LCMT2O60294 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.61□□□□□ -1.99
LCMT2O60294 ELOCP29-201ENST00000588193 334 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 AC005498.1-201ENST00000592125 465 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 AC012065.4-201ENST00000602445 679 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 AL355877.2-201ENST00000603670 358 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 AL161729.4-201ENST00000604650 476 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
LCMT2O60294 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
LCMT2O60294 AC068057.2-201ENST00000624047 895 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.61□□□□□ -1.99
LCMT2O60294 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
LCMT2O60294 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LCMT2O60294 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LCMT2O60294 Z82195.2-201ENST00000612348 18351 ntBASIC2.61□□□□□ -1.99
LCMT2O60294 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.6□□□□□ -1.99
LCMT2O60294 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LCMT2O60294 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LCMT2O60294 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.6□□□□□ -1.99
LCMT2O60294 RNU4-21P-201ENST00000362802 126 ntBASIC2.6□□□□□ -1.99
LCMT2O60294 RNU5F-7P-201ENST00000363696 115 ntBASIC2.6□□□□□ -1.99
LCMT2O60294 RNU5E-5P-201ENST00000365379 116 ntBASIC2.6□□□□□ -1.99
LCMT2O60294 RNU6-217P-201ENST00000384164 104 ntBASIC2.6□□□□□ -1.99
LCMT2O60294 MT-TH-201ENST00000387441 69 ntBASIC2.6□□□□□ -1.99
LCMT2O60294 AL356057.2-201ENST00000403318 432 ntBASIC2.6□□□□□ -1.99
LCMT2O60294 AL021407.1-201ENST00000404531 386 ntBASIC2.6□□□□□ -1.99
LCMT2O60294 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.6□□□□□ -1.99
LCMT2O60294 BX682237.1-201ENST00000415016 335 ntBASIC2.6□□□□□ -1.99
LCMT2O60294 NPM1P11-201ENST00000417106 855 ntBASIC2.6□□□□□ -1.99
LCMT2O60294 AL451054.2-201ENST00000420896 202 ntBASIC2.6□□□□□ -1.99
LCMT2O60294 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.6□□□□□ -1.99
LCMT2O60294 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.6□□□□□ -1.99
LCMT2O60294 AL353777.1-201ENST00000425552 326 ntBASIC2.6□□□□□ -1.99
LCMT2O60294 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.6□□□□□ -1.99
LCMT2O60294 AL358075.3-201ENST00000426289 226 ntBASIC2.6□□□□□ -1.99
LCMT2O60294 RPL22P17-201ENST00000438729 315 ntBASIC2.6□□□□□ -1.99
LCMT2O60294 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.6□□□□□ -1.99
LCMT2O60294 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.6□□□□□ -1.99
LCMT2O60294 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.6□□□□□ -1.99
LCMT2O60294 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.6□□□□□ -1.99
LCMT2O60294 AP001486.1-201ENST00000463339 476 ntBASIC2.6□□□□□ -1.99
LCMT2O60294 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.6□□□□□ -1.99
LCMT2O60294 SUMO2P6-201ENST00000505273 288 ntBASIC2.6□□□□□ -1.99
LCMT2O60294 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms