Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 MTND5P1-201ENST00000445440 1375 ntBASIC3.38□□□□□ -1.87
LDB2O43679 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
LDB2O43679 AL137003.2-201ENST00000606924 2538 ntBASIC3.37□□□□□ -1.87
LDB2O43679 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
LDB2O43679 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LDB2O43679 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LDB2O43679 AL049781.1-201ENST00000623195 3585 ntBASIC3.37□□□□□ -1.87
LDB2O43679 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.37□□□□□ -1.87
LDB2O43679 AL354719.1-201ENST00000406535 843 ntBASIC3.37□□□□□ -1.87
LDB2O43679 OR9R1P-201ENST00000412200 877 ntBASIC3.37□□□□□ -1.87
LDB2O43679 RAC1P6-201ENST00000423911 575 ntBASIC3.37□□□□□ -1.87
LDB2O43679 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
LDB2O43679 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.37□□□□□ -1.87
LDB2O43679 GAPDHP27-201ENST00000447427 1020 ntBASIC3.37□□□□□ -1.87
LDB2O43679 RNU7-182P-201ENST00000459009 62 ntBASIC3.37□□□□□ -1.87
LDB2O43679 AC010631.1-201ENST00000474150 156 ntBASIC3.37□□□□□ -1.87
LDB2O43679 RPL31P13-201ENST00000484151 370 ntBASIC3.37□□□□□ -1.87
LDB2O43679 AL163973.1-201ENST00000484753 577 ntBASIC3.37□□□□□ -1.87
LDB2O43679 RPL21P13-201ENST00000488305 481 ntBASIC3.37□□□□□ -1.87
LDB2O43679 AC093663.1-201ENST00000497190 394 ntBASIC3.37□□□□□ -1.87
LDB2O43679 MTCYBP18-201ENST00000501056 747 ntBASIC3.37□□□□□ -1.87
LDB2O43679 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.37□□□□□ -1.87
LDB2O43679 RNA5SP401-201ENST00000515920 127 ntBASIC3.37□□□□□ -1.87
LDB2O43679 SNORD60.2-201ENST00000516883 86 ntBASIC3.37□□□□□ -1.87
LDB2O43679 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
LDB2O43679 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.37□□□□□ -1.87
LDB2O43679 AC012182.1-201ENST00000570133 895 ntBASIC3.37□□□□□ -1.87
LDB2O43679 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.37□□□□□ -1.87
LDB2O43679 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.37□□□□□ -1.87
LDB2O43679 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.37□□□□□ -1.87
LDB2O43679 AL035413.2-201ENST00000604801 525 ntBASIC3.37□□□□□ -1.87
LDB2O43679 AC103710.3-201ENST00000608157 948 ntBASIC3.37□□□□□ -1.87
LDB2O43679 RMST_3.1-201ENST00000611651 109 ntBASIC3.37□□□□□ -1.87
LDB2O43679 AC024614.3-201ENST00000637860 256 ntBASIC3.37□□□□□ -1.87
LDB2O43679 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LDB2O43679 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LDB2O43679 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LDB2O43679 AC004972.1-201ENST00000623934 2209 ntBASIC3.36□□□□□ -1.87
LDB2O43679 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LDB2O43679 RNU6-179P-201ENST00000363350 107 ntBASIC3.36□□□□□ -1.87
LDB2O43679 Y_RNA.160-201ENST00000363677 92 ntBASIC3.36□□□□□ -1.87
LDB2O43679 SNORA62.1-201ENST00000364287 154 ntBASIC3.36□□□□□ -1.87
LDB2O43679 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LDB2O43679 RNU6-76P-201ENST00000384060 104 ntBASIC3.36□□□□□ -1.87
LDB2O43679 MIR607-201ENST00000385241 96 ntBASIC3.36□□□□□ -1.87
LDB2O43679 TXNP7-201ENST00000406296 293 ntBASIC3.36□□□□□ -1.87
LDB2O43679 AL356776.1-201ENST00000406574 447 ntBASIC3.36□□□□□ -1.87
LDB2O43679 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.36□□□□□ -1.87
LDB2O43679 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.36□□□□□ -1.87
LDB2O43679 MTATP6P4-201ENST00000427725 675 ntBASIC3.36□□□□□ -1.87
LDB2O43679 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.36□□□□□ -1.87
LDB2O43679 BX679664.1-201ENST00000434429 253 ntBASIC3.36□□□□□ -1.87
LDB2O43679 AL121601.2-201ENST00000438019 707 ntBASIC3.36□□□□□ -1.87
LDB2O43679 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.36□□□□□ -1.87
LDB2O43679 AC073415.1-201ENST00000449240 153 ntBASIC3.36□□□□□ -1.87
LDB2O43679 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.36□□□□□ -1.87
LDB2O43679 RPL23AP62-201ENST00000463396 453 ntBASIC3.36□□□□□ -1.87
LDB2O43679 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.36□□□□□ -1.87
LDB2O43679 AC018710.1-201ENST00000506509 158 ntBASIC3.36□□□□□ -1.87
LDB2O43679 AC098799.2-201ENST00000509466 868 ntBASIC3.36□□□□□ -1.87
LDB2O43679 AC025465.4-201ENST00000513422 638 ntBASIC3.36□□□□□ -1.87
LDB2O43679 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.36□□□□□ -1.87
LDB2O43679 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.36□□□□□ -1.87
LDB2O43679 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.36□□□□□ -1.87
LDB2O43679 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.36□□□□□ -1.87
LDB2O43679 AC011611.1-201ENST00000552179 197 ntBASIC3.36□□□□□ -1.87
LDB2O43679 OR4H12P-201ENST00000556269 907 ntBASIC3.36□□□□□ -1.87
LDB2O43679 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.36□□□□□ -1.87
LDB2O43679 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.36□□□□□ -1.87
LDB2O43679 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.36□□□□□ -1.87
LDB2O43679 MIR4775-201ENST00000581168 75 ntBASIC3.36□□□□□ -1.87
LDB2O43679 AC005730.3-201ENST00000583067 366 ntBASIC3.36□□□□□ -1.87
LDB2O43679 BNIP3P30-201ENST00000601184 574 ntBASIC3.36□□□□□ -1.87
LDB2O43679 AC130324.3-201ENST00000614165 542 ntBASIC3.36□□□□□ -1.87
LDB2O43679 AC004696.1-201ENST00000614345 607 ntBASIC3.36□□□□□ -1.87
LDB2O43679 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.36□□□□□ -1.87
LDB2O43679 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.36□□□□□ -1.87
LDB2O43679 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LDB2O43679 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LDB2O43679 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LDB2O43679 AC009812.4-201ENST00000569134 1805 ntBASIC3.35□□□□□ -1.87
LDB2O43679 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.35□□□□□ -1.87
LDB2O43679 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
LDB2O43679 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
LDB2O43679 RPL7P26-201ENST00000333817 754 ntBASIC3.35□□□□□ -1.87
LDB2O43679 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LDB2O43679 RNU6-188P-201ENST00000364207 107 ntBASIC3.35□□□□□ -1.87
LDB2O43679 SNORA7.2-201ENST00000364446 145 ntBASIC3.35□□□□□ -1.87
LDB2O43679 MIR491-201ENST00000384877 84 ntBASIC3.35□□□□□ -1.87
LDB2O43679 RAP1BP3-201ENST00000407180 549 ntBASIC3.35□□□□□ -1.87
LDB2O43679 RNU6-1068P-201ENST00000410958 103 ntBASIC3.35□□□□□ -1.87
LDB2O43679 RNA5SP31-201ENST00000411144 127 ntBASIC3.35□□□□□ -1.87
LDB2O43679 RNU6-373P-201ENST00000411247 98 ntBASIC3.35□□□□□ -1.87
LDB2O43679 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB2O43679 RPL21P111-201ENST00000418453 477 ntBASIC3.35□□□□□ -1.87
LDB2O43679 MTCO1P39-201ENST00000426148 480 ntBASIC3.35□□□□□ -1.87
LDB2O43679 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.35□□□□□ -1.87
LDB2O43679 AC097713.2-201ENST00000430199 356 ntBASIC3.35□□□□□ -1.87
LDB2O43679 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB2O43679 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms