Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.27□□□□□ -2.05
CHMP2AO43633 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.27□□□□□ -2.05
CHMP2AO43633 SDR42E1P3-201ENST00000438345 502 ntBASIC2.27□□□□□ -2.05
CHMP2AO43633 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.27□□□□□ -2.05
CHMP2AO43633 MTATP6P7-201ENST00000453315 681 ntBASIC2.27□□□□□ -2.05
CHMP2AO43633 ATG12P2-201ENST00000456830 416 ntBASIC2.27□□□□□ -2.05
CHMP2AO43633 RNU7-136P-201ENST00000458819 69 ntBASIC2.27□□□□□ -2.05
CHMP2AO43633 snoU13.8-201ENST00000458890 104 ntBASIC2.27□□□□□ -2.05
CHMP2AO43633 AC097493.1-201ENST00000463958 372 ntBASIC2.27□□□□□ -2.05
CHMP2AO43633 DYNLL1P5-201ENST00000467158 270 ntBASIC2.27□□□□□ -2.05
CHMP2AO43633 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.27□□□□□ -2.05
CHMP2AO43633 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.27□□□□□ -2.05
CHMP2AO43633 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CHMP2AO43633 NRON-201ENST00000517270 370 ntBASIC2.27□□□□□ -2.05
CHMP2AO43633 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.27□□□□□ -2.05
CHMP2AO43633 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.27□□□□□ -2.05
CHMP2AO43633 AC121758.2-201ENST00000553271 193 ntBASIC2.27□□□□□ -2.05
CHMP2AO43633 AC009127.3-201ENST00000570531 403 ntBASIC2.27□□□□□ -2.05
CHMP2AO43633 RPS15AP11-201ENST00000594193 385 ntBASIC2.27□□□□□ -2.05
CHMP2AO43633 AC025588.2-201ENST00000604851 466 ntBASIC2.27□□□□□ -2.05
CHMP2AO43633 AP000720.1-201ENST00000625091 483 ntBASIC2.27□□□□□ -2.05
CHMP2AO43633 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.27□□□□□ -2.05
CHMP2AO43633 CDR1-202ENST00000625883 1485 ntBASIC2.26□□□□□ -2.05
CHMP2AO43633 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CHMP2AO43633 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CHMP2AO43633 SNORA23-201ENST00000365128 182 ntBASIC2.26□□□□□ -2.05
CHMP2AO43633 RNU6-1257P-201ENST00000384625 110 ntBASIC2.26□□□□□ -2.05
CHMP2AO43633 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.26□□□□□ -2.05
CHMP2AO43633 MIR1289-2-201ENST00000408360 111 ntBASIC2.26□□□□□ -2.05
CHMP2AO43633 CYCSP48-201ENST00000417124 323 ntBASIC2.26□□□□□ -2.05
CHMP2AO43633 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.26□□□□□ -2.05
CHMP2AO43633 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.26□□□□□ -2.05
CHMP2AO43633 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.26□□□□□ -2.05
CHMP2AO43633 KLF3P2-201ENST00000465138 268 ntBASIC2.26□□□□□ -2.05
CHMP2AO43633 AC068587.2-201ENST00000478386 781 ntBASIC2.26□□□□□ -2.05
CHMP2AO43633 AC069528.1-202ENST00000482888 637 ntBASIC2.26□□□□□ -2.05
CHMP2AO43633 AC021146.8-201ENST00000507455 733 ntBASIC2.26□□□□□ -2.05
CHMP2AO43633 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.26□□□□□ -2.05
CHMP2AO43633 RNU6-583P-201ENST00000516012 92 ntBASIC2.26□□□□□ -2.05
CHMP2AO43633 SNORA31.6-201ENST00000516241 130 ntBASIC2.26□□□□□ -2.05
CHMP2AO43633 HSPE1P18-201ENST00000517602 280 ntBASIC2.26□□□□□ -2.05
CHMP2AO43633 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.26□□□□□ -2.05
CHMP2AO43633 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.26□□□□□ -2.05
CHMP2AO43633 AC002545.1-201ENST00000592511 181 ntBASIC2.26□□□□□ -2.05
CHMP2AO43633 AC069431.2-201ENST00000604149 1099 ntBASIC2.26□□□□□ -2.05
CHMP2AO43633 AC025594.3-201ENST00000613068 790 ntBASIC2.26□□□□□ -2.05
CHMP2AO43633 AC013476.2-201ENST00000614456 459 ntBASIC2.26□□□□□ -2.05
CHMP2AO43633 AL121895.2-201ENST00000619558 447 ntBASIC2.26□□□□□ -2.05
CHMP2AO43633 AC109454.4-201ENST00000623411 649 ntBASIC2.26□□□□□ -2.05
CHMP2AO43633 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CHMP2AO43633 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.25□□□□□ -2.05
CHMP2AO43633 RNU4-51P-201ENST00000364206 140 ntBASIC2.25□□□□□ -2.05
CHMP2AO43633 AL590084.1-201ENST00000407885 387 ntBASIC2.25□□□□□ -2.05
CHMP2AO43633 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.25□□□□□ -2.05
CHMP2AO43633 HMGB1P49-201ENST00000418882 569 ntBASIC2.25□□□□□ -2.05
CHMP2AO43633 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CHMP2AO43633 AC007560.1-201ENST00000426912 237 ntBASIC2.25□□□□□ -2.05
CHMP2AO43633 PGBD4P3-201ENST00000440731 581 ntBASIC2.25□□□□□ -2.05
CHMP2AO43633 OSTCP8-201ENST00000445117 448 ntBASIC2.25□□□□□ -2.05
CHMP2AO43633 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.25□□□□□ -2.05
CHMP2AO43633 RPL23AP7-203ENST00000449021 469 ntBASIC2.25□□□□□ -2.05
CHMP2AO43633 AL021397.1-201ENST00000451806 248 ntBASIC2.25□□□□□ -2.05
CHMP2AO43633 snoU13.15-201ENST00000459407 104 ntBASIC2.25□□□□□ -2.05
CHMP2AO43633 UBL5P3-201ENST00000475112 231 ntBASIC2.25□□□□□ -2.05
CHMP2AO43633 TRBV1-201ENST00000476502 284 ntBASIC2.25□□□□□ -2.05
CHMP2AO43633 AC114981.1-201ENST00000503897 678 ntBASIC2.25□□□□□ -2.05
CHMP2AO43633 AC006499.2-201ENST00000513470 337 ntBASIC2.25□□□□□ -2.05
CHMP2AO43633 RNU6-714P-201ENST00000516963 103 ntBASIC2.25□□□□□ -2.05
CHMP2AO43633 AC010186.2-204ENST00000537668 439 ntBASIC2.25□□□□□ -2.05
CHMP2AO43633 MIR5571-201ENST00000577998 113 ntBASIC2.25□□□□□ -2.05
CHMP2AO43633 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.25□□□□□ -2.05
CHMP2AO43633 AC103710.2-201ENST00000609912 942 ntBASIC2.25□□□□□ -2.05
CHMP2AO43633 PART1_2.1-201ENST00000612397 250 ntBASIC2.25□□□□□ -2.05
CHMP2AO43633 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.25□□□□□ -2.05
CHMP2AO43633 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.25□□□□□ -2.05
CHMP2AO43633 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.25□□□□□ -2.05
CHMP2AO43633 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.25□□□□□ -2.05
CHMP2AO43633 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CHMP2AO43633 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CHMP2AO43633 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CHMP2AO43633 RNU6-777P-201ENST00000364265 104 ntBASIC2.24□□□□□ -2.05
CHMP2AO43633 RNU6-1078P-201ENST00000364522 103 ntBASIC2.24□□□□□ -2.05
CHMP2AO43633 SNORD116.1-201ENST00000365628 92 ntBASIC2.24□□□□□ -2.05
CHMP2AO43633 RNU6-637P-201ENST00000384050 107 ntBASIC2.24□□□□□ -2.05
CHMP2AO43633 RNU6-1242P-201ENST00000391052 103 ntBASIC2.24□□□□□ -2.05
CHMP2AO43633 TPMTP2-201ENST00000414372 726 ntBASIC2.24□□□□□ -2.05
CHMP2AO43633 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.24□□□□□ -2.05
CHMP2AO43633 HMGB1P9-201ENST00000429856 646 ntBASIC2.24□□□□□ -2.05
CHMP2AO43633 MED14P1-201ENST00000430517 648 ntBASIC2.24□□□□□ -2.05
CHMP2AO43633 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.24□□□□□ -2.05
CHMP2AO43633 HMGN2P3-201ENST00000433603 273 ntBASIC2.24□□□□□ -2.05
CHMP2AO43633 HMGN2P5-201ENST00000436882 273 ntBASIC2.24□□□□□ -2.05
CHMP2AO43633 MTND2P20-201ENST00000440805 661 ntBASIC2.24□□□□□ -2.05
CHMP2AO43633 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.24□□□□□ -2.05
CHMP2AO43633 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.24□□□□□ -2.05
CHMP2AO43633 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.24□□□□□ -2.05
CHMP2AO43633 MTATP6P14-201ENST00000455189 673 ntBASIC2.24□□□□□ -2.05
CHMP2AO43633 SNORD121B-201ENST00000458838 81 ntBASIC2.24□□□□□ -2.05
CHMP2AO43633 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.24□□□□□ -2.05
CHMP2AO43633 AC072039.1-201ENST00000477611 581 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms