Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.88□□□□□ -2.11
SGCEO43556 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.87□□□□□ -2.11
SGCEO43556 RNU6-486P-201ENST00000363116 107 ntBASIC1.87□□□□□ -2.11
SGCEO43556 RNU6-778P-201ENST00000363269 103 ntBASIC1.87□□□□□ -2.11
SGCEO43556 RNU5B-4P-201ENST00000363508 111 ntBASIC1.87□□□□□ -2.11
SGCEO43556 RNU6-1207P-201ENST00000384343 107 ntBASIC1.87□□□□□ -2.11
SGCEO43556 RNU1-148P-201ENST00000384472 162 ntBASIC1.87□□□□□ -2.11
SGCEO43556 RNU6-952P-201ENST00000391164 108 ntBASIC1.87□□□□□ -2.11
SGCEO43556 RPL26P27-201ENST00000414397 437 ntBASIC1.87□□□□□ -2.11
SGCEO43556 BX119904.4-201ENST00000424402 301 ntBASIC1.87□□□□□ -2.11
SGCEO43556 ELOCP14-201ENST00000428070 331 ntBASIC1.87□□□□□ -2.11
SGCEO43556 NANOGP2-201ENST00000435391 727 ntBASIC1.87□□□□□ -2.11
SGCEO43556 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.87□□□□□ -2.11
SGCEO43556 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
SGCEO43556 ELOCP7-201ENST00000439968 331 ntBASIC1.87□□□□□ -2.11
SGCEO43556 BX322784.1-201ENST00000455793 1077 ntBASIC1.87□□□□□ -2.11
SGCEO43556 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.87□□□□□ -2.11
SGCEO43556 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SGCEO43556 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.87□□□□□ -2.11
SGCEO43556 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.87□□□□□ -2.11
SGCEO43556 AC006499.2-201ENST00000513470 337 ntBASIC1.87□□□□□ -2.11
SGCEO43556 RN7SKP31-201ENST00000516354 278 ntBASIC1.87□□□□□ -2.11
SGCEO43556 AP003497.1-201ENST00000528472 562 ntBASIC1.87□□□□□ -2.11
SGCEO43556 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.87□□□□□ -2.11
SGCEO43556 OR6C7P-201ENST00000547875 934 ntBASIC1.87□□□□□ -2.11
SGCEO43556 AL512310.1-201ENST00000548639 172 ntBASIC1.87□□□□□ -2.11
SGCEO43556 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.87□□□□□ -2.11
SGCEO43556 AC007229.1-201ENST00000590455 412 ntBASIC1.87□□□□□ -2.11
SGCEO43556 AC068276.1-201ENST00000605793 379 ntBASIC1.87□□□□□ -2.11
SGCEO43556 AC091932.3-201ENST00000624223 323 ntBASIC1.87□□□□□ -2.11
SGCEO43556 U2.21-201ENST00000637295 81 ntBASIC1.87□□□□□ -2.11
SGCEO43556 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
SGCEO43556 AP005901.5-201ENST00000545779 1796 ntBASIC1.87□□□□□ -2.11
SGCEO43556 MTND5P29-201ENST00000458676 1807 ntBASIC1.87□□□□□ -2.11
SGCEO43556 AL359854.1-201ENST00000614203 1594 ntBASIC1.86□□□□□ -2.11
SGCEO43556 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.86□□□□□ -2.11
SGCEO43556 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.86□□□□□ -2.11
SGCEO43556 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.86□□□□□ -2.11
SGCEO43556 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.86□□□□□ -2.11
SGCEO43556 UBE2D3P1-201ENST00000436669 444 ntBASIC1.86□□□□□ -2.11
SGCEO43556 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.86□□□□□ -2.11
SGCEO43556 NDUFAF4P2-201ENST00000445374 520 ntBASIC1.86□□□□□ -2.11
SGCEO43556 AL118520.1-201ENST00000450770 291 ntBASIC1.86□□□□□ -2.11
SGCEO43556 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.86□□□□□ -2.11
SGCEO43556 AC055731.1-201ENST00000474387 401 ntBASIC1.86□□□□□ -2.11
SGCEO43556 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.86□□□□□ -2.11
SGCEO43556 AC104090.1-201ENST00000506341 1171 ntBASIC1.86□□□□□ -2.11
SGCEO43556 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.86□□□□□ -2.11
SGCEO43556 AC008526.1-201ENST00000509149 338 ntBASIC1.86□□□□□ -2.11
SGCEO43556 AF213884.2-201ENST00000510417 903 ntBASIC1.86□□□□□ -2.11
SGCEO43556 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.86□□□□□ -2.11
SGCEO43556 AC110760.3-202ENST00000515177 371 ntBASIC1.86□□□□□ -2.11
SGCEO43556 RNA5SP112-201ENST00000515937 99 ntBASIC1.86□□□□□ -2.11
SGCEO43556 RNU2-44P-201ENST00000516795 194 ntBASIC1.86□□□□□ -2.11
SGCEO43556 SNORA31.25-201ENST00000517242 134 ntBASIC1.86□□□□□ -2.11
SGCEO43556 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.86□□□□□ -2.11
SGCEO43556 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.86□□□□□ -2.11
SGCEO43556 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.86□□□□□ -2.11
SGCEO43556 DEFB130C-202ENST00000530001 230 ntBASIC1.86□□□□□ -2.11
SGCEO43556 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.86□□□□□ -2.11
SGCEO43556 CYCSP2-201ENST00000558168 301 ntBASIC1.86□□□□□ -2.11
SGCEO43556 MIR4435-1-201ENST00000582552 80 ntBASIC1.86□□□□□ -2.11
SGCEO43556 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.86□□□□□ -2.11
SGCEO43556 TUG1_2.1-201ENST00000614234 87 ntBASIC1.86□□□□□ -2.11
SGCEO43556 AC079416.3-201ENST00000624479 549 ntBASIC1.86□□□□□ -2.11
SGCEO43556 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.86□□□□□ -2.11
SGCEO43556 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SGCEO43556 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SGCEO43556 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.85□□□□□ -2.11
SGCEO43556 ADAM3A-203ENST00000461344 2157 ntBASIC1.85□□□□□ -2.11
SGCEO43556 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SGCEO43556 RNU6-432P-201ENST00000384196 109 ntBASIC1.85□□□□□ -2.11
SGCEO43556 Y_RNA.500-201ENST00000384466 111 ntBASIC1.85□□□□□ -2.11
SGCEO43556 RNU6-114P-201ENST00000384704 105 ntBASIC1.85□□□□□ -2.11
SGCEO43556 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.85□□□□□ -2.11
SGCEO43556 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.85□□□□□ -2.11
SGCEO43556 RNA5SP508-201ENST00000411327 119 ntBASIC1.85□□□□□ -2.11
SGCEO43556 AL161449.1-201ENST00000414531 1199 ntBASIC1.85□□□□□ -2.11
SGCEO43556 RPS24P7-201ENST00000416921 246 ntBASIC1.85□□□□□ -2.11
SGCEO43556 ZNF90P2-204ENST00000419323 1075 ntBASIC1.85□□□□□ -2.11
SGCEO43556 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.85□□□□□ -2.11
SGCEO43556 MRPS36P1-201ENST00000421291 307 ntBASIC1.85□□□□□ -2.11
SGCEO43556 PTP4A1P7-201ENST00000423476 514 ntBASIC1.85□□□□□ -2.11
SGCEO43556 SKA2P1-201ENST00000425592 390 ntBASIC1.85□□□□□ -2.11
SGCEO43556 SDR42E1P3-201ENST00000438345 502 ntBASIC1.85□□□□□ -2.11
SGCEO43556 PTGES3P1-201ENST00000439531 483 ntBASIC1.85□□□□□ -2.11
SGCEO43556 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.85□□□□□ -2.11
SGCEO43556 RPL18AP17-201ENST00000455326 198 ntBASIC1.85□□□□□ -2.11
SGCEO43556 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.85□□□□□ -2.11
SGCEO43556 HMGB1P36-201ENST00000487709 576 ntBASIC1.85□□□□□ -2.11
SGCEO43556 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.85□□□□□ -2.11
SGCEO43556 RNU2-19P-201ENST00000517288 84 ntBASIC1.85□□□□□ -2.11
SGCEO43556 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.85□□□□□ -2.11
SGCEO43556 AP003049.1-201ENST00000529418 457 ntBASIC1.85□□□□□ -2.11
SGCEO43556 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.85□□□□□ -2.11
SGCEO43556 MRPS36P5-201ENST00000551909 298 ntBASIC1.85□□□□□ -2.11
SGCEO43556 OR11H5P-201ENST00000554039 926 ntBASIC1.85□□□□□ -2.11
SGCEO43556 AC021739.1-201ENST00000559631 174 ntBASIC1.85□□□□□ -2.11
SGCEO43556 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.85□□□□□ -2.11
SGCEO43556 AF038458.1-201ENST00000588406 262 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms