Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.5□□□□□ -1.85
SMAD6O43541 CEP170P1-201ENST00000502249 4587 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SMAD6O43541 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SMAD6O43541 AC006020.1-201ENST00000420179 1854 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SMAD6O43541 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
SMAD6O43541 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.5□□□□□ -1.85
SMAD6O43541 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SMAD6O43541 Y_RNA.132-201ENST00000363421 102 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 RNA5SP387-201ENST00000364226 106 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 DEFB109C-201ENST00000382575 264 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 DEFB109B-201ENST00000382656 264 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 Y_RNA.431-201ENST00000384086 102 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 MIR34B-201ENST00000385076 84 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 AL136116.1-201ENST00000403591 381 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.5□□□□□ -1.85
SMAD6O43541 RPS7P15-201ENST00000415804 584 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 AL353729.1-201ENST00000425044 720 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 RPS26P56-201ENST00000444468 240 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.5□□□□□ -1.85
SMAD6O43541 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.5□□□□□ -1.85
SMAD6O43541 AL136126.1-201ENST00000473603 402 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 AC096576.1-201ENST00000489014 359 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 AC093677.1-201ENST00000514414 678 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 SNORA19.2-201ENST00000516013 114 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 AP005597.4-201ENST00000526762 229 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 AP000907.2-201ENST00000530827 353 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 AC087241.2-201ENST00000535801 324 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 SCOCP1-201ENST00000554676 349 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 OR4T1P-201ENST00000554933 911 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.5□□□□□ -1.85
SMAD6O43541 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.5□□□□□ -1.85
SMAD6O43541 AC098848.2-201ENST00000588023 330 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 BNIP3P22-201ENST00000593399 556 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.5□□□□□ -1.85
SMAD6O43541 AL390240.1-201ENST00000612950 384 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.5□□□□□ -1.85
SMAD6O43541 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.5□□□□□ -1.85
SMAD6O43541 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SMAD6O43541 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SMAD6O43541 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SMAD6O43541 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.5□□□□□ -1.85
SMAD6O43541 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SMAD6O43541 AC058791.1-201ENST00000608412 3198 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SMAD6O43541 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.49□□□□□ -1.85
SMAD6O43541 OR4G1P-203ENST00000641984 1631 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SMAD6O43541 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SMAD6O43541 ZNF826P-207ENST00000622273 1910 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SMAD6O43541 Y_RNA.184-201ENST00000363884 108 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 SNORA48.8-201ENST00000391324 134 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 SRIP2-201ENST00000428470 166 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.49□□□□□ -1.85
SMAD6O43541 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.49□□□□□ -1.85
SMAD6O43541 AL590233.1-201ENST00000430017 456 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 HIGD1AP11-201ENST00000438361 280 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.49□□□□□ -1.85
SMAD6O43541 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.49□□□□□ -1.85
SMAD6O43541 MTCO2P29-201ENST00000465212 189 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 AC087879.1-201ENST00000474343 374 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 AC093663.1-201ENST00000497190 394 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.49□□□□□ -1.85
SMAD6O43541 RPL38P4-201ENST00000502376 214 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.49□□□□□ -1.85
SMAD6O43541 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.49□□□□□ -1.85
SMAD6O43541 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SMAD6O43541 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.49□□□□□ -1.85
SMAD6O43541 RNU6-327P-201ENST00000516270 127 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 RN7SKP116-201ENST00000516902 319 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 RNU6-1231P-201ENST00000517185 103 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.49□□□□□ -1.85
SMAD6O43541 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.49□□□□□ -1.85
SMAD6O43541 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.49□□□□□ -1.85
SMAD6O43541 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.49□□□□□ -1.85
SMAD6O43541 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.49□□□□□ -1.85
SMAD6O43541 NCAPGP2-201ENST00000557911 754 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.49□□□□□ -1.85
SMAD6O43541 MIR3146-201ENST00000580367 79 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.49□□□□□ -1.85
SMAD6O43541 UBE2L4-201ENST00000587688 464 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.49□□□□□ -1.85
SMAD6O43541 AC007179.3-201ENST00000604976 235 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 AL603758.1-201ENST00000618654 241 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 AC022149.2-201ENST00000621061 203 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.49□□□□□ -1.85
SMAD6O43541 CYP3A51P-201ENST00000633513 256 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 AC002546.1-201ENST00000588041 2504 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.49□□□□□ -1.85
SMAD6O43541 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SMAD6O43541 MTND4P35-201ENST00000604257 1375 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 AC004925.1-201ENST00000624256 2706 ntBASIC3.49□□□□□ -1.85
SMAD6O43541 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SMAD6O43541 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SMAD6O43541 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SMAD6O43541 AC130650.2-201ENST00000618736 2403 ntBASIC3.48□□□□□ -1.85
SMAD6O43541 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms