Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 MIR3609-201ENST00000582661 80 ntBASIC4.03□□□□□ -1.76
PRPF3O43395 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.03□□□□□ -1.76
PRPF3O43395 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.03□□□□□ -1.76
PRPF3O43395 AC022893.3-201ENST00000607665 437 ntBASIC4.03□□□□□ -1.76
PRPF3O43395 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
PRPF3O43395 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.03□□□□□ -1.76
PRPF3O43395 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.03□□□□□ -1.76
PRPF3O43395 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.03□□□□□ -1.76
PRPF3O43395 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.03□□□□□ -1.76
PRPF3O43395 AC005183.1-201ENST00000603687 1979 ntBASIC4.03□□□□□ -1.76
PRPF3O43395 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF3O43395 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF3O43395 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF3O43395 AL139276.1-201ENST00000311910 1001 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 SNORA62.1-201ENST00000364287 154 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 SNORD115-7-201ENST00000365306 82 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPF3O43395 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPF3O43395 RNA5SP171-201ENST00000391071 115 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPF3O43395 BTF3P7-201ENST00000407097 488 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPF3O43395 RNU2-9P-201ENST00000410194 145 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 RNA5SP44-201ENST00000410446 133 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 AC114491.1-201ENST00000416095 246 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 AC007919.1-201ENST00000429380 217 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 GPM6BP2-201ENST00000432046 144 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 AC073063.1-201ENST00000434352 607 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 RPS15AP9-201ENST00000439856 381 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 CALM1P1-201ENST00000442082 433 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 GPM6BP1-201ENST00000446387 144 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 AC003071.1-201ENST00000451219 789 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPF3O43395 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPF3O43395 AC092798.1-201ENST00000458542 409 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPF3O43395 RPL7L1P8-201ENST00000469911 741 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 KC877373.1-201ENST00000479066 408 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 AC079140.5-201ENST00000507882 310 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 AC098591.2-201ENST00000510152 315 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 SNORA70.14-201ENST00000516205 110 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPF3O43395 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF3O43395 MIR4474-201ENST00000579189 78 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.02□□□□□ -1.77
PRPF3O43395 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPF3O43395 AC008739.3-201ENST00000603262 127 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 AL138889.2-201ENST00000603883 242 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 AP001596.2-201ENST00000608410 312 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 AC006111.3-201ENST00000622137 383 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 AL357559.1-201ENST00000622228 274 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.02□□□□□ -1.77
PRPF3O43395 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPF3O43395 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF3O43395 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.02□□□□□ -1.77
PRPF3O43395 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF3O43395 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF3O43395 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.02□□□□□ -1.77
PRPF3O43395 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF3O43395 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF3O43395 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
PRPF3O43395 MTND4P14-201ENST00000435799 1354 ntBASIC4.02□□□□□ -1.77
PRPF3O43395 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRPF3O43395 AL356274.2-201ENST00000624379 3752 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRPF3O43395 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PRPF3O43395 RNU6-1287P-201ENST00000362914 107 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 RNU6-996P-201ENST00000365438 107 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 RNU6-1060P-201ENST00000384664 107 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 MIR200C-201ENST00000384980 68 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 SNORD17-201ENST00000390930 237 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 SNORD115-47-201ENST00000391226 86 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.01□□□□□ -1.77
PRPF3O43395 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRPF3O43395 RN7SKP111-201ENST00000410349 271 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.01□□□□□ -1.77
PRPF3O43395 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.01□□□□□ -1.77
PRPF3O43395 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.01□□□□□ -1.77
PRPF3O43395 AL158071.1-201ENST00000430315 461 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.01□□□□□ -1.77
PRPF3O43395 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.01□□□□□ -1.77
PRPF3O43395 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.01□□□□□ -1.77
PRPF3O43395 RPL7P54-201ENST00000438336 674 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
PRPF3O43395 SEPT14P3-201ENST00000439401 183 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 AL732372.2-207ENST00000445840 183 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 AC008264.1-201ENST00000447612 367 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 SSXP4-201ENST00000451349 245 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 SEPT14P2-201ENST00000453405 183 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.01□□□□□ -1.77
PRPF3O43395 AL121769.1-201ENST00000469473 401 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 AL163973.1-201ENST00000484753 577 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 MTAPP1-201ENST00000489154 819 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.01□□□□□ -1.77
PRPF3O43395 AC026784.1-201ENST00000507986 352 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.01□□□□□ -1.77
PRPF3O43395 SEPT14P4-201ENST00000513445 186 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 Y_RNA.689-201ENST00000516589 107 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 FO082796.1-201ENST00000523795 183 ntBASIC4.01□□□□□ -1.77
PRPF3O43395 CASP1P1-201ENST00000526345 212 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms