Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.75□□□□□ -1.81
PHGDHO43175 AL118558.2-201ENST00000556294 238 ntBASIC3.75□□□□□ -1.81
PHGDHO43175 AC018638.8-201ENST00000588755 281 ntBASIC3.75□□□□□ -1.81
PHGDHO43175 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.75□□□□□ -1.81
PHGDHO43175 AC027309.3-201ENST00000623419 351 ntBASIC3.75□□□□□ -1.81
PHGDHO43175 AC090617.10-201ENST00000624308 134 ntBASIC3.75□□□□□ -1.81
PHGDHO43175 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.75□□□□□ -1.81
PHGDHO43175 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
PHGDHO43175 AC008725.1-201ENST00000605123 2263 ntBASIC3.75□□□□□ -1.81
PHGDHO43175 CUL1P1-201ENST00000509510 2425 ntBASIC3.75□□□□□ -1.81
PHGDHO43175 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.75□□□□□ -1.81
PHGDHO43175 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.75□□□□□ -1.81
PHGDHO43175 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PHGDHO43175 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.74□□□□□ -1.81
PHGDHO43175 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PHGDHO43175 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.74□□□□□ -1.81
PHGDHO43175 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PHGDHO43175 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PHGDHO43175 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PHGDHO43175 RNU6-393P-201ENST00000384475 107 ntBASIC3.74□□□□□ -1.81
PHGDHO43175 Y_RNA.615-201ENST00000410769 117 ntBASIC3.74□□□□□ -1.81
PHGDHO43175 RN7SKP53-201ENST00000411337 315 ntBASIC3.74□□□□□ -1.81
PHGDHO43175 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.74□□□□□ -1.81
PHGDHO43175 AL162151.2-201ENST00000448875 158 ntBASIC3.74□□□□□ -1.81
PHGDHO43175 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.74□□□□□ -1.81
PHGDHO43175 SNRPGP3-201ENST00000469405 227 ntBASIC3.74□□□□□ -1.81
PHGDHO43175 MTCO2P30-201ENST00000503662 364 ntBASIC3.74□□□□□ -1.81
PHGDHO43175 AC098799.2-201ENST00000509466 868 ntBASIC3.74□□□□□ -1.81
PHGDHO43175 LRRC34P2-201ENST00000514850 553 ntBASIC3.74□□□□□ -1.81
PHGDHO43175 RNU6-507P-201ENST00000516045 100 ntBASIC3.74□□□□□ -1.81
PHGDHO43175 RNU6-1282P-201ENST00000516735 96 ntBASIC3.74□□□□□ -1.81
PHGDHO43175 AC022690.1-201ENST00000526681 550 ntBASIC3.74□□□□□ -1.81
PHGDHO43175 TOMM20P2-201ENST00000540082 421 ntBASIC3.74□□□□□ -1.81
PHGDHO43175 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.74□□□□□ -1.81
PHGDHO43175 AC023050.3-201ENST00000541142 333 ntBASIC3.74□□□□□ -1.81
PHGDHO43175 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.74□□□□□ -1.81
PHGDHO43175 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PHGDHO43175 MIR548AC-201ENST00000585049 88 ntBASIC3.74□□□□□ -1.81
PHGDHO43175 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.74□□□□□ -1.81
PHGDHO43175 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.74□□□□□ -1.81
PHGDHO43175 AC136601.2-201ENST00000604356 474 ntBASIC3.74□□□□□ -1.81
PHGDHO43175 AL590392.1-201ENST00000604960 446 ntBASIC3.74□□□□□ -1.81
PHGDHO43175 SNORA62.6-201ENST00000606322 83 ntBASIC3.74□□□□□ -1.81
PHGDHO43175 AP003400.5-201ENST00000624827 617 ntBASIC3.74□□□□□ -1.81
PHGDHO43175 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.74□□□□□ -1.81
PHGDHO43175 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.74□□□□□ -1.81
PHGDHO43175 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PHGDHO43175 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
PHGDHO43175 AC073073.2-201ENST00000609827 2578 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PHGDHO43175 MIR372-201ENST00000362225 67 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 Y_RNA.70-201ENST00000362886 110 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 RN7SKP227-201ENST00000364445 330 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 Y_RNA.378-201ENST00000365652 113 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 AC068538.1-201ENST00000376856 336 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PHGDHO43175 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.73□□□□□ -1.81
PHGDHO43175 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.73□□□□□ -1.81
PHGDHO43175 AC092047.1-201ENST00000424997 240 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 ZNF863P-201ENST00000426746 417 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 RPL23AP69-201ENST00000431134 458 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.73□□□□□ -1.81
PHGDHO43175 NDUFB1P1-201ENST00000435191 180 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.73□□□□□ -1.81
PHGDHO43175 AC098614.3-201ENST00000438957 440 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 AC008264.1-201ENST00000447612 367 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.73□□□□□ -1.81
PHGDHO43175 AL590639.1-201ENST00000456484 337 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.73□□□□□ -1.81
PHGDHO43175 AC114786.4-201ENST00000508771 728 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.73□□□□□ -1.81
PHGDHO43175 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.73□□□□□ -1.81
PHGDHO43175 AC010486.1-201ENST00000511793 424 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 RNA5SP165-201ENST00000517142 115 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 MIR2116-201ENST00000517221 80 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.73□□□□□ -1.81
PHGDHO43175 AL157871.3-201ENST00000557231 293 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.73□□□□□ -1.81
PHGDHO43175 MIR1273C-201ENST00000578669 77 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 MIR4644-201ENST00000579929 84 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 MIR5692A1-201ENST00000580523 69 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 AC011712.1-201ENST00000588959 234 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 AC092807.2-201ENST00000609367 243 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 MIR6798-201ENST00000612887 67 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PHGDHO43175 SNORD39.4-201ENST00000620099 78 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 MIR6810-201ENST00000622701 70 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PHGDHO43175 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PHGDHO43175 MTND4P35-201ENST00000604257 1375 ntBASIC3.73□□□□□ -1.81
PHGDHO43175 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PHGDHO43175 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.72□□□□□ -1.81
PHGDHO43175 FAM35BP-202ENST00000497389 3337 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 TNPO1P3-201ENST00000436471 2662 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
PHGDHO43175 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PHGDHO43175 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PHGDHO43175 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.72□□□□□ -1.81
PHGDHO43175 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PHGDHO43175 Y_RNA.72-201ENST00000362894 103 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms