Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CLDN3O15551 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CLDN3O15551 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.64□□□□□ -1.99
CLDN3O15551 MTND5P29-201ENST00000458676 1807 ntBASIC2.63□□□□□ -1.99
CLDN3O15551 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.63□□□□□ -1.99
CLDN3O15551 RNU6-1167P-201ENST00000363227 94 ntBASIC2.63□□□□□ -1.99
CLDN3O15551 RN7SKP226-201ENST00000364912 300 ntBASIC2.63□□□□□ -1.99
CLDN3O15551 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.63□□□□□ -1.99
CLDN3O15551 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.63□□□□□ -1.99
CLDN3O15551 RNU6-278P-201ENST00000390945 109 ntBASIC2.63□□□□□ -1.99
CLDN3O15551 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.63□□□□□ -1.99
CLDN3O15551 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.63□□□□□ -1.99
CLDN3O15551 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.63□□□□□ -1.99
CLDN3O15551 MTND1P28-201ENST00000435623 950 ntBASIC2.63□□□□□ -1.99
CLDN3O15551 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.63□□□□□ -1.99
CLDN3O15551 EEF1B2P7-201ENST00000451177 676 ntBASIC2.63□□□□□ -1.99
CLDN3O15551 AC234781.5-201ENST00000508429 271 ntBASIC2.63□□□□□ -1.99
CLDN3O15551 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.63□□□□□ -1.99
CLDN3O15551 AC021269.2-201ENST00000532318 330 ntBASIC2.63□□□□□ -1.99
CLDN3O15551 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.63□□□□□ -1.99
CLDN3O15551 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.63□□□□□ -1.99
CLDN3O15551 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.63□□□□□ -1.99
CLDN3O15551 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.63□□□□□ -1.99
CLDN3O15551 MIR544B-201ENST00000582372 78 ntBASIC2.63□□□□□ -1.99
CLDN3O15551 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
CLDN3O15551 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CLDN3O15551 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.63□□□□□ -1.99
CLDN3O15551 AC012150.2-201ENST00000621300 544 ntBASIC2.63□□□□□ -1.99
CLDN3O15551 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.63□□□□□ -1.99
CLDN3O15551 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CLDN3O15551 MAPK10-266ENST00000641066 6555 ntBASIC2.63□□□□□ -1.99
CLDN3O15551 AC069528.2-201ENST00000624849 1991 ntBASIC2.63□□□□□ -1.99
CLDN3O15551 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.62□□□□□ -1.99
CLDN3O15551 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLDN3O15551 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
CLDN3O15551 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
CLDN3O15551 MIR6073-201ENST00000352083 89 ntBASIC2.62□□□□□ -1.99
CLDN3O15551 RNU6-750P-201ENST00000390946 107 ntBASIC2.62□□□□□ -1.99
CLDN3O15551 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.62□□□□□ -1.99
CLDN3O15551 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.62□□□□□ -1.99
CLDN3O15551 BPY2DP-201ENST00000422208 265 ntBASIC2.62□□□□□ -1.99
CLDN3O15551 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.62□□□□□ -1.99
CLDN3O15551 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.62□□□□□ -1.99
CLDN3O15551 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.62□□□□□ -1.99
CLDN3O15551 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CLDN3O15551 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.62□□□□□ -1.99
CLDN3O15551 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.62□□□□□ -1.99
CLDN3O15551 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.62□□□□□ -1.99
CLDN3O15551 AC055855.1-201ENST00000489563 579 ntBASIC2.62□□□□□ -1.99
CLDN3O15551 RPS27AP10-201ENST00000496103 208 ntBASIC2.62□□□□□ -1.99
CLDN3O15551 AC026436.1-201ENST00000510537 270 ntBASIC2.62□□□□□ -1.99
CLDN3O15551 RNA5SP24-201ENST00000516478 95 ntBASIC2.62□□□□□ -1.99
CLDN3O15551 RNU6-64P-201ENST00000517119 105 ntBASIC2.62□□□□□ -1.99
CLDN3O15551 RNA5SP165-201ENST00000517142 115 ntBASIC2.62□□□□□ -1.99
CLDN3O15551 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.62□□□□□ -1.99
CLDN3O15551 AC105185.1-201ENST00000518705 535 ntBASIC2.62□□□□□ -1.99
CLDN3O15551 AP003122.3-201ENST00000526316 255 ntBASIC2.62□□□□□ -1.99
CLDN3O15551 AP004247.1-201ENST00000531556 1289 ntBASIC2.62□□□□□ -1.99
CLDN3O15551 AC068587.4-201ENST00000533893 186 ntBASIC2.62□□□□□ -1.99
CLDN3O15551 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.62□□□□□ -1.99
CLDN3O15551 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.62□□□□□ -1.99
CLDN3O15551 DUXAP1-201ENST00000556632 463 ntBASIC2.62□□□□□ -1.99
CLDN3O15551 AC136618.2-201ENST00000575091 400 ntBASIC2.62□□□□□ -1.99
CLDN3O15551 MIR4446-201ENST00000578505 67 ntBASIC2.62□□□□□ -1.99
CLDN3O15551 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.62□□□□□ -1.99
CLDN3O15551 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.62□□□□□ -1.99
CLDN3O15551 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.62□□□□□ -1.99
CLDN3O15551 AC010297.1-201ENST00000623948 149 ntBASIC2.62□□□□□ -1.99
CLDN3O15551 AL136313.1-201ENST00000624804 202 ntBASIC2.62□□□□□ -1.99
CLDN3O15551 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.62□□□□□ -1.99
CLDN3O15551 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLDN3O15551 Z82195.2-201ENST00000612348 18351 ntBASIC2.62□□□□□ -1.99
CLDN3O15551 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CLDN3O15551 AC110491.1-201ENST00000562191 2010 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.61□□□□□ -1.99
CLDN3O15551 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.61□□□□□ -1.99
CLDN3O15551 RNU6-433P-201ENST00000363216 104 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 RNA5SP88-201ENST00000365560 109 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 XGY1-201ENST00000381172 446 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 RNU6-157P-201ENST00000383957 107 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 AL359634.1-202ENST00000404721 284 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 RNA5SP181-201ENST00000410246 98 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 RNU2-68P-201ENST00000410878 191 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 NDUFS5P4-201ENST00000412983 318 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 VPS26BP1-201ENST00000417155 755 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.61□□□□□ -1.99
CLDN3O15551 MTCO2P21-201ENST00000419780 677 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.61□□□□□ -1.99
CLDN3O15551 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.61□□□□□ -1.99
CLDN3O15551 AC005094.1-201ENST00000440420 368 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.61□□□□□ -1.99
CLDN3O15551 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.61□□□□□ -1.99
CLDN3O15551 AC107626.1-201ENST00000471084 183 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.61□□□□□ -1.99
CLDN3O15551 AC098591.2-201ENST00000510152 315 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 AC010486.1-201ENST00000511793 424 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.61□□□□□ -1.99
CLDN3O15551 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.61□□□□□ -1.99
CLDN3O15551 AC025881.1-201ENST00000518851 512 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms