Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 MIR19A-201ENST00000384878 82 ntBASIC2.54□□□□□ -2
MSH4O15457 MIR221-201ENST00000385135 110 ntBASIC2.54□□□□□ -2
MSH4O15457 RNA5SP354-201ENST00000391247 136 ntBASIC2.54□□□□□ -2
MSH4O15457 AC119751.3-201ENST00000399720 670 ntBASIC2.54□□□□□ -2
MSH4O15457 RAP1BP1-201ENST00000412709 553 ntBASIC2.54□□□□□ -2
MSH4O15457 RPL21P24-201ENST00000413752 448 ntBASIC2.54□□□□□ -2
MSH4O15457 HMGB1P11-201ENST00000413899 637 ntBASIC2.54□□□□□ -2
MSH4O15457 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.54□□□□□ -2
MSH4O15457 ZNF863P-201ENST00000426746 417 ntBASIC2.54□□□□□ -2
MSH4O15457 AL365496.1-201ENST00000426885 215 ntBASIC2.54□□□□□ -2
MSH4O15457 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.54□□□□□ -2
MSH4O15457 RNU7-23P-201ENST00000459465 62 ntBASIC2.54□□□□□ -2
MSH4O15457 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.54□□□□□ -2
MSH4O15457 RPS27P26-201ENST00000494583 239 ntBASIC2.54□□□□□ -2
MSH4O15457 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.54□□□□□ -2
MSH4O15457 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.54□□□□□ -2
MSH4O15457 HSPE1P23-201ENST00000509838 286 ntBASIC2.54□□□□□ -2
MSH4O15457 LTV1P1-201ENST00000510683 1237 ntBASIC2.54□□□□□ -2
MSH4O15457 AC110760.3-202ENST00000515177 371 ntBASIC2.54□□□□□ -2
MSH4O15457 HSPE1P20-201ENST00000538133 289 ntBASIC2.54□□□□□ -2
MSH4O15457 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.54□□□□□ -2
MSH4O15457 AL354943.1-201ENST00000572103 781 ntBASIC2.54□□□□□ -2
MSH4O15457 AC020895.1-201ENST00000595362 272 ntBASIC2.54□□□□□ -2
MSH4O15457 AC007038.2-201ENST00000608095 740 ntBASIC2.54□□□□□ -2
MSH4O15457 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.54□□□□□ -2
MSH4O15457 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.54□□□□□ -2
MSH4O15457 AC006378.2-201ENST00000623178 2476 ntBASIC2.54□□□□□ -2
MSH4O15457 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
MSH4O15457 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.54□□□□□ -2
MSH4O15457 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
MSH4O15457 MTND4P16-201ENST00000466108 1367 ntBASIC2.53□□□□□ -2
MSH4O15457 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
MSH4O15457 RNU1-105P-201ENST00000363470 161 ntBASIC2.53□□□□□ -2
MSH4O15457 RNU6-140P-201ENST00000384566 108 ntBASIC2.53□□□□□ -2
MSH4O15457 RNU6-253P-201ENST00000384730 105 ntBASIC2.53□□□□□ -2
MSH4O15457 MIR767-201ENST00000390228 109 ntBASIC2.53□□□□□ -2
MSH4O15457 RNA5SP492-201ENST00000411330 114 ntBASIC2.53□□□□□ -2
MSH4O15457 RPL7P37-201ENST00000425095 738 ntBASIC2.53□□□□□ -2
MSH4O15457 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.53□□□□□ -2
MSH4O15457 AC092427.1-202ENST00000430569 476 ntBASIC2.53□□□□□ -2
MSH4O15457 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.53□□□□□ -2
MSH4O15457 UBE2FP3-201ENST00000436366 524 ntBASIC2.53□□□□□ -2
MSH4O15457 ELOCP30-201ENST00000447108 299 ntBASIC2.53□□□□□ -2
MSH4O15457 Z73417.1-201ENST00000447373 778 ntBASIC2.53□□□□□ -2
MSH4O15457 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.53□□□□□ -2
MSH4O15457 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.53□□□□□ -2
MSH4O15457 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.53□□□□□ -2
MSH4O15457 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.53□□□□□ -2
MSH4O15457 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.53□□□□□ -2
MSH4O15457 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.53□□□□□ -2
MSH4O15457 AC078814.3-201ENST00000553036 491 ntBASIC2.53□□□□□ -2
MSH4O15457 AC021171.1-201ENST00000603137 706 ntBASIC2.53□□□□□ -2
MSH4O15457 AC105148.1-201ENST00000604961 409 ntBASIC2.53□□□□□ -2
MSH4O15457 BCRP9-201ENST00000605312 388 ntBASIC2.53□□□□□ -2
MSH4O15457 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.53□□□□□ -2
MSH4O15457 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.53□□□□□ -2
MSH4O15457 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.53□□□□□ -2
MSH4O15457 AC012150.2-201ENST00000621300 544 ntBASIC2.53□□□□□ -2
MSH4O15457 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.53□□□□□ -2
MSH4O15457 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
MSH4O15457 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.53□□□□□ -2
MSH4O15457 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
MSH4O15457 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
MSH4O15457 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
MSH4O15457 CCNG1P1-201ENST00000406783 885 ntBASIC2.52□□□□□ -2.01
MSH4O15457 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.52□□□□□ -2.01
MSH4O15457 RN7SKP223-201ENST00000410582 62 ntBASIC2.52□□□□□ -2.01
MSH4O15457 RPL22P18-201ENST00000417197 377 ntBASIC2.52□□□□□ -2.01
MSH4O15457 AC009414.1-201ENST00000427200 443 ntBASIC2.52□□□□□ -2.01
MSH4O15457 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.52□□□□□ -2.01
MSH4O15457 USP12PX-201ENST00000432383 1057 ntBASIC2.52□□□□□ -2.01
MSH4O15457 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.52□□□□□ -2.01
MSH4O15457 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.52□□□□□ -2.01
MSH4O15457 Z96811.1-201ENST00000445880 108 ntBASIC2.52□□□□□ -2.01
MSH4O15457 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.52□□□□□ -2.01
MSH4O15457 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.52□□□□□ -2.01
MSH4O15457 RNU7-59P-201ENST00000459101 61 ntBASIC2.52□□□□□ -2.01
MSH4O15457 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.52□□□□□ -2.01
MSH4O15457 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.52□□□□□ -2.01
MSH4O15457 AC010631.1-201ENST00000474150 156 ntBASIC2.52□□□□□ -2.01
MSH4O15457 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.52□□□□□ -2.01
MSH4O15457 ANXA2P1-201ENST00000505539 926 ntBASIC2.52□□□□□ -2.01
MSH4O15457 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.52□□□□□ -2.01
MSH4O15457 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.52□□□□□ -2.01
MSH4O15457 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.52□□□□□ -2.01
MSH4O15457 RNU1-41P-201ENST00000516161 162 ntBASIC2.52□□□□□ -2.01
MSH4O15457 RNU1-48P-201ENST00000516400 162 ntBASIC2.52□□□□□ -2.01
MSH4O15457 AC087373.1-201ENST00000524920 491 ntBASIC2.52□□□□□ -2.01
MSH4O15457 ATP5F1P5-201ENST00000526403 760 ntBASIC2.52□□□□□ -2.01
MSH4O15457 SNRPGP18-201ENST00000553000 214 ntBASIC2.52□□□□□ -2.01
MSH4O15457 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.52□□□□□ -2.01
MSH4O15457 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.52□□□□□ -2.01
MSH4O15457 AC068790.3-201ENST00000602988 553 ntBASIC2.52□□□□□ -2.01
MSH4O15457 AP000787.2-201ENST00000604432 568 ntBASIC2.52□□□□□ -2.01
MSH4O15457 AC025588.2-201ENST00000604851 466 ntBASIC2.52□□□□□ -2.01
MSH4O15457 AC019159.1-201ENST00000605094 187 ntBASIC2.52□□□□□ -2.01
MSH4O15457 AC013244.3-201ENST00000605614 388 ntBASIC2.52□□□□□ -2.01
MSH4O15457 AC091965.4-201ENST00000607691 587 ntBASIC2.52□□□□□ -2.01
MSH4O15457 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.52□□□□□ -2.01
MSH4O15457 AC097655.1-201ENST00000635075 318 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms