Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SMAD9O15198 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.12□□□□□ -1.91
SMAD9O15198 MIR4425-201ENST00000580572 84 ntBASIC3.12□□□□□ -1.91
SMAD9O15198 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.12□□□□□ -1.91
SMAD9O15198 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SMAD9O15198 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.12□□□□□ -1.91
SMAD9O15198 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.12□□□□□ -1.91
SMAD9O15198 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
SMAD9O15198 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SMAD9O15198 AL049781.1-201ENST00000623195 3585 ntBASIC3.11□□□□□ -1.91
SMAD9O15198 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SMAD9O15198 RNU6-179P-201ENST00000363350 107 ntBASIC3.11□□□□□ -1.91
SMAD9O15198 AP002088.1-201ENST00000382740 395 ntBASIC3.11□□□□□ -1.91
SMAD9O15198 RNU6-74P-201ENST00000384235 107 ntBASIC3.11□□□□□ -1.91
SMAD9O15198 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
SMAD9O15198 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.11□□□□□ -1.91
SMAD9O15198 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.11□□□□□ -1.91
SMAD9O15198 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.11□□□□□ -1.91
SMAD9O15198 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.11□□□□□ -1.91
SMAD9O15198 AP000907.1-201ENST00000428428 510 ntBASIC3.11□□□□□ -1.91
SMAD9O15198 AL158071.1-201ENST00000430315 461 ntBASIC3.11□□□□□ -1.91
SMAD9O15198 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.11□□□□□ -1.91
SMAD9O15198 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.11□□□□□ -1.91
SMAD9O15198 AC022364.2-201ENST00000457963 554 ntBASIC3.11□□□□□ -1.91
SMAD9O15198 RNU6-420P-201ENST00000458780 107 ntBASIC3.11□□□□□ -1.91
SMAD9O15198 AC025518.1-201ENST00000479856 347 ntBASIC3.11□□□□□ -1.91
SMAD9O15198 RPL32P34-201ENST00000486380 400 ntBASIC3.11□□□□□ -1.91
SMAD9O15198 RPL9P6-201ENST00000492764 598 ntBASIC3.11□□□□□ -1.91
SMAD9O15198 FCF1P3-201ENST00000496394 590 ntBASIC3.11□□□□□ -1.91
SMAD9O15198 PCBP2P3-201ENST00000509726 843 ntBASIC3.11□□□□□ -1.91
SMAD9O15198 AC108078.2-201ENST00000510750 236 ntBASIC3.11□□□□□ -1.91
SMAD9O15198 RNU6-928P-201ENST00000516876 104 ntBASIC3.11□□□□□ -1.91
SMAD9O15198 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.11□□□□□ -1.91
SMAD9O15198 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.11□□□□□ -1.91
SMAD9O15198 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.11□□□□□ -1.91
SMAD9O15198 MIR3609-201ENST00000582661 80 ntBASIC3.11□□□□□ -1.91
SMAD9O15198 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.11□□□□□ -1.91
SMAD9O15198 AC107294.1-201ENST00000609524 467 ntBASIC3.11□□□□□ -1.91
SMAD9O15198 MIR7975-201ENST00000619350 68 ntBASIC3.11□□□□□ -1.91
SMAD9O15198 AC022149.2-201ENST00000621061 203 ntBASIC3.11□□□□□ -1.91
SMAD9O15198 AL359740.1-201ENST00000624340 592 ntBASIC3.11□□□□□ -1.91
SMAD9O15198 MIR6863-201ENST00000636112 90 ntBASIC3.11□□□□□ -1.91
SMAD9O15198 AC099654.12-201ENST00000639868 649 ntBASIC3.11□□□□□ -1.91
SMAD9O15198 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
SMAD9O15198 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SMAD9O15198 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SMAD9O15198 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SMAD9O15198 AC004972.1-201ENST00000623934 2209 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SMAD9O15198 Y_RNA.1-201ENST00000352915 104 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 Y_RNA.3-201ENST00000362331 103 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 RNU4-35P-201ENST00000362588 141 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 SNORA14A-201ENST00000364773 135 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 RNU6-1103P-201ENST00000384150 107 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 SNORA24.1-201ENST00000384401 135 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SMAD9O15198 SNORD17-201ENST00000390930 237 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.1□□□□□ -1.91
SMAD9O15198 RNU2-9P-201ENST00000410194 145 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SMAD9O15198 RPS12P24-201ENST00000412619 387 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.1□□□□□ -1.91
SMAD9O15198 MTATP6P18-201ENST00000417994 673 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 RPS15AP6-201ENST00000420703 385 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 AL159987.2-201ENST00000432754 307 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 AL591212.2-201ENST00000433923 257 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.1□□□□□ -1.91
SMAD9O15198 DNAJC19P4-201ENST00000440115 345 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 MTND1P1-201ENST00000445453 368 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.1□□□□□ -1.91
SMAD9O15198 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.1□□□□□ -1.91
SMAD9O15198 RPS3AP14-201ENST00000483907 780 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 HSPD1P15-201ENST00000505573 1122 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.1□□□□□ -1.91
SMAD9O15198 AC007458.1-201ENST00000542812 373 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SMAD9O15198 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.1□□□□□ -1.91
SMAD9O15198 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.1□□□□□ -1.91
SMAD9O15198 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SMAD9O15198 AC011602.1-201ENST00000546484 331 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.1□□□□□ -1.91
SMAD9O15198 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.1□□□□□ -1.91
SMAD9O15198 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.1□□□□□ -1.91
SMAD9O15198 AC174048.1-201ENST00000603389 144 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 AL161798.1-201ENST00000604630 131 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 AL158032.1-201ENST00000605401 106 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 AC130324.3-201ENST00000614165 542 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 AC073534.2-201ENST00000620377 381 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.1□□□□□ -1.91
SMAD9O15198 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.1□□□□□ -1.91
SMAD9O15198 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 MTND5P42-201ENST00000637720 498 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 GABRG2-229ENST00000641017 3628 ntBASIC3.1□□□□□ -1.91
SMAD9O15198 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.1□□□□□ -1.91
SMAD9O15198 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
SMAD9O15198 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.1□□□□□ -1.91
SMAD9O15198 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SMAD9O15198 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SMAD9O15198 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SMAD9O15198 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms