Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AP000942.3-201ENST00000603702 160 ntBASIC1.73□□□□□ -2.13
UBFD1O14562 AL035411.2-201ENST00000604022 421 ntBASIC1.73□□□□□ -2.13
UBFD1O14562 AL390208.1-201ENST00000605885 644 ntBASIC1.73□□□□□ -2.13
UBFD1O14562 SCARNA17.4-201ENST00000614296 143 ntBASIC1.73□□□□□ -2.13
UBFD1O14562 AL603758.1-201ENST00000618654 241 ntBASIC1.73□□□□□ -2.13
UBFD1O14562 AL596245.1-201ENST00000618994 362 ntBASIC1.73□□□□□ -2.13
UBFD1O14562 AC120349.2-201ENST00000625002 298 ntBASIC1.73□□□□□ -2.13
UBFD1O14562 AP003399.1-201ENST00000637534 361 ntBASIC1.73□□□□□ -2.13
UBFD1O14562 AL354685.2-201ENST00000448218 1447 ntBASIC1.73□□□□□ -2.13
UBFD1O14562 Y_RNA.408-201ENST00000383987 102 ntBASIC1.72□□□□□ -2.13
UBFD1O14562 RNU6-14P-201ENST00000384630 106 ntBASIC1.72□□□□□ -2.13
UBFD1O14562 MIR17-201ENST00000385012 84 ntBASIC1.72□□□□□ -2.13
UBFD1O14562 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.72□□□□□ -2.13
UBFD1O14562 U8.13-201ENST00000390842 128 ntBASIC1.72□□□□□ -2.13
UBFD1O14562 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
UBFD1O14562 HMGB1P17-201ENST00000403495 628 ntBASIC1.72□□□□□ -2.13
UBFD1O14562 MIR1294-201ENST00000408503 142 ntBASIC1.72□□□□□ -2.13
UBFD1O14562 RNU2-42P-201ENST00000410697 113 ntBASIC1.72□□□□□ -2.13
UBFD1O14562 AC023141.4-201ENST00000412031 328 ntBASIC1.72□□□□□ -2.13
UBFD1O14562 ZNF90P2-204ENST00000419323 1075 ntBASIC1.72□□□□□ -2.13
UBFD1O14562 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.72□□□□□ -2.13
UBFD1O14562 AL358075.3-201ENST00000426289 226 ntBASIC1.72□□□□□ -2.13
UBFD1O14562 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.72□□□□□ -2.13
UBFD1O14562 AL049734.2-201ENST00000441066 616 ntBASIC1.72□□□□□ -2.13
UBFD1O14562 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.72□□□□□ -2.13
UBFD1O14562 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.72□□□□□ -2.13
UBFD1O14562 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.72□□□□□ -2.13
UBFD1O14562 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.72□□□□□ -2.13
UBFD1O14562 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.72□□□□□ -2.13
UBFD1O14562 AC093801.2-201ENST00000503966 1050 ntBASIC1.72□□□□□ -2.13
UBFD1O14562 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.72□□□□□ -2.13
UBFD1O14562 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.72□□□□□ -2.13
UBFD1O14562 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.72□□□□□ -2.13
UBFD1O14562 AC022861.1-201ENST00000522981 663 ntBASIC1.72□□□□□ -2.13
UBFD1O14562 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
UBFD1O14562 AC124947.2-202ENST00000552735 133 ntBASIC1.72□□□□□ -2.13
UBFD1O14562 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.72□□□□□ -2.13
UBFD1O14562 AC023825.1-201ENST00000566704 1030 ntBASIC1.72□□□□□ -2.13
UBFD1O14562 AC024614.2-201ENST00000577584 372 ntBASIC1.72□□□□□ -2.13
UBFD1O14562 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.72□□□□□ -2.13
UBFD1O14562 MTND4LP5-201ENST00000605152 292 ntBASIC1.72□□□□□ -2.13
UBFD1O14562 AC068057.2-201ENST00000624047 895 ntBASIC1.72□□□□□ -2.13
UBFD1O14562 AC091932.3-201ENST00000624223 323 ntBASIC1.72□□□□□ -2.13
UBFD1O14562 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.72□□□□□ -2.13
UBFD1O14562 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.72□□□□□ -2.13
UBFD1O14562 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
UBFD1O14562 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
UBFD1O14562 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
UBFD1O14562 SNORA38-201ENST00000363946 132 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 RNU6-343P-201ENST00000364709 104 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 RNU1-39P-201ENST00000383897 165 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.71□□□□□ -2.14
UBFD1O14562 AL109755.1-201ENST00000401791 649 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 AL161449.1-201ENST00000414531 1199 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 DPRXP1-201ENST00000426312 460 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 AL356867.1-201ENST00000429623 299 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.71□□□□□ -2.14
UBFD1O14562 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.71□□□□□ -2.14
UBFD1O14562 AC007677.1-201ENST00000445757 515 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 MTND2P24-201ENST00000453434 806 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.71□□□□□ -2.14
UBFD1O14562 AP1S2P1-201ENST00000457344 379 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 RNA5SP233-201ENST00000459153 113 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 MRPS17P3-201ENST00000465453 385 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
UBFD1O14562 AC138853.1-201ENST00000503549 823 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 NDUFB4P2-201ENST00000509515 391 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 COL6A4P2-205ENST00000509855 506 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 RN7SKP31-201ENST00000516354 278 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 SNORA31.18-201ENST00000517043 134 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 HSPA8P13-201ENST00000523715 472 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.71□□□□□ -2.14
UBFD1O14562 AC023824.2-201ENST00000566185 400 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 AC023043.2-201ENST00000589678 1026 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 AL355877.2-201ENST00000603670 358 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 AC005332.10-201ENST00000612725 619 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 MIR6845-201ENST00000613182 61 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 AP005901.5-201ENST00000545779 1796 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 AC005832.2-201ENST00000538921 1430 ntBASIC1.71□□□□□ -2.14
UBFD1O14562 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
UBFD1O14562 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
UBFD1O14562 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
UBFD1O14562 RNU1-17P-201ENST00000363022 152 ntBASIC1.7□□□□□ -2.14
UBFD1O14562 Y_RNA.595-201ENST00000410403 105 ntBASIC1.7□□□□□ -2.14
UBFD1O14562 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.7□□□□□ -2.14
UBFD1O14562 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.7□□□□□ -2.14
UBFD1O14562 RPL23AP39-201ENST00000415533 405 ntBASIC1.7□□□□□ -2.14
UBFD1O14562 CCDC58P2-201ENST00000417131 366 ntBASIC1.7□□□□□ -2.14
UBFD1O14562 BX119904.4-201ENST00000424402 301 ntBASIC1.7□□□□□ -2.14
UBFD1O14562 AL592045.1-201ENST00000429867 352 ntBASIC1.7□□□□□ -2.14
UBFD1O14562 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.7□□□□□ -2.14
UBFD1O14562 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.7□□□□□ -2.14
UBFD1O14562 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.7□□□□□ -2.14
UBFD1O14562 RN7SKP210-201ENST00000459176 261 ntBASIC1.7□□□□□ -2.14
UBFD1O14562 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.7□□□□□ -2.14
UBFD1O14562 MTND4P2-201ENST00000507767 1203 ntBASIC1.7□□□□□ -2.14
UBFD1O14562 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.7□□□□□ -2.14
UBFD1O14562 AP003049.1-201ENST00000529418 457 ntBASIC1.7□□□□□ -2.14
UBFD1O14562 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 292 ms