Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AL133153.1-201ENST00000557756 303 ntBASIC1.79□□□□□ -2.12
UPK2O00526 MIR3167-201ENST00000579623 85 ntBASIC1.79□□□□□ -2.12
UPK2O00526 AC098826.3-201ENST00000603823 466 ntBASIC1.79□□□□□ -2.12
UPK2O00526 AL161798.1-201ENST00000604630 131 ntBASIC1.79□□□□□ -2.12
UPK2O00526 AL133445.2-201ENST00000611191 527 ntBASIC1.79□□□□□ -2.12
UPK2O00526 PART1_2.1-201ENST00000612397 250 ntBASIC1.79□□□□□ -2.12
UPK2O00526 AC009831.4-201ENST00000620744 325 ntBASIC1.79□□□□□ -2.12
UPK2O00526 AC007998.5-201ENST00000622938 237 ntBASIC1.79□□□□□ -2.12
UPK2O00526 MTND5P29-201ENST00000458676 1807 ntBASIC1.79□□□□□ -2.12
UPK2O00526 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.79□□□□□ -2.12
UPK2O00526 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.78□□□□□ -2.12
UPK2O00526 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.78□□□□□ -2.12
UPK2O00526 RNU6-512P-201ENST00000364438 103 ntBASIC1.78□□□□□ -2.12
UPK2O00526 RNU6-658P-201ENST00000384606 106 ntBASIC1.78□□□□□ -2.12
UPK2O00526 SNORA67.4-201ENST00000384688 142 ntBASIC1.78□□□□□ -2.12
UPK2O00526 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
UPK2O00526 RNU2-68P-201ENST00000410878 191 ntBASIC1.78□□□□□ -2.12
UPK2O00526 NPM1P11-201ENST00000417106 855 ntBASIC1.78□□□□□ -2.12
UPK2O00526 MORF4L1P6-201ENST00000418771 268 ntBASIC1.78□□□□□ -2.12
UPK2O00526 AL353729.1-201ENST00000425044 720 ntBASIC1.78□□□□□ -2.12
UPK2O00526 AC244035.1-201ENST00000430042 390 ntBASIC1.78□□□□□ -2.12
UPK2O00526 RPS25P9-201ENST00000435591 252 ntBASIC1.78□□□□□ -2.12
UPK2O00526 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.78□□□□□ -2.12
UPK2O00526 FABP5P14-201ENST00000437273 393 ntBASIC1.78□□□□□ -2.12
UPK2O00526 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.78□□□□□ -2.12
UPK2O00526 AP000542.1-201ENST00000448473 371 ntBASIC1.78□□□□□ -2.12
UPK2O00526 PAXBP1P1-201ENST00000449315 447 ntBASIC1.78□□□□□ -2.12
UPK2O00526 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.78□□□□□ -2.12
UPK2O00526 AC013267.1-201ENST00000458227 267 ntBASIC1.78□□□□□ -2.12
UPK2O00526 AC126389.1-201ENST00000477436 290 ntBASIC1.78□□□□□ -2.12
UPK2O00526 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.78□□□□□ -2.12
UPK2O00526 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
UPK2O00526 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.78□□□□□ -2.12
UPK2O00526 AC110760.3-202ENST00000515177 371 ntBASIC1.78□□□□□ -2.12
UPK2O00526 SNORA25.11-201ENST00000515935 105 ntBASIC1.78□□□□□ -2.12
UPK2O00526 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.78□□□□□ -2.12
UPK2O00526 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.78□□□□□ -2.12
UPK2O00526 AC006199.1-201ENST00000548728 219 ntBASIC1.78□□□□□ -2.12
UPK2O00526 AC121758.2-201ENST00000553271 193 ntBASIC1.78□□□□□ -2.12
UPK2O00526 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.78□□□□□ -2.12
UPK2O00526 AC021739.1-201ENST00000559631 174 ntBASIC1.78□□□□□ -2.12
UPK2O00526 ISCA1P3-201ENST00000577104 373 ntBASIC1.78□□□□□ -2.12
UPK2O00526 MIR4765-201ENST00000585007 77 ntBASIC1.78□□□□□ -2.12
UPK2O00526 AC073544.2-201ENST00000601155 540 ntBASIC1.78□□□□□ -2.12
UPK2O00526 AC107294.1-201ENST00000609524 467 ntBASIC1.78□□□□□ -2.12
UPK2O00526 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.78□□□□□ -2.12
UPK2O00526 AC245297.2-201ENST00000610119 565 ntBASIC1.78□□□□□ -2.12
UPK2O00526 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
UPK2O00526 AP002791.1-201ENST00000623291 381 ntBASIC1.78□□□□□ -2.12
UPK2O00526 AC079416.3-201ENST00000624479 549 ntBASIC1.78□□□□□ -2.12
UPK2O00526 PISRT1-201ENST00000626175 531 ntBASIC1.78□□□□□ -2.12
UPK2O00526 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
UPK2O00526 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
UPK2O00526 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.77□□□□□ -2.13
UPK2O00526 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
UPK2O00526 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
UPK2O00526 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
UPK2O00526 RNU6-413P-201ENST00000384115 107 ntBASIC1.77□□□□□ -2.13
UPK2O00526 MIR221-201ENST00000385135 110 ntBASIC1.77□□□□□ -2.13
UPK2O00526 SNORD23.1-201ENST00000408212 104 ntBASIC1.77□□□□□ -2.13
UPK2O00526 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.77□□□□□ -2.13
UPK2O00526 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.77□□□□□ -2.13
UPK2O00526 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.77□□□□□ -2.13
UPK2O00526 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.77□□□□□ -2.13
UPK2O00526 USP9YP26-201ENST00000421008 661 ntBASIC1.77□□□□□ -2.13
UPK2O00526 EIF4EP4-201ENST00000424916 578 ntBASIC1.77□□□□□ -2.13
UPK2O00526 MICF-203ENST00000432679 129 ntBASIC1.77□□□□□ -2.13
UPK2O00526 RPL36AP53-201ENST00000432891 316 ntBASIC1.77□□□□□ -2.13
UPK2O00526 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.77□□□□□ -2.13
UPK2O00526 AL117351.1-201ENST00000438864 766 ntBASIC1.77□□□□□ -2.13
UPK2O00526 AL161651.1-201ENST00000440882 223 ntBASIC1.77□□□□□ -2.13
UPK2O00526 HMGN2P10-201ENST00000448085 265 ntBASIC1.77□□□□□ -2.13
UPK2O00526 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.77□□□□□ -2.13
UPK2O00526 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.77□□□□□ -2.13
UPK2O00526 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.77□□□□□ -2.13
UPK2O00526 AC005410.1-202ENST00000460347 485 ntBASIC1.77□□□□□ -2.13
UPK2O00526 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.77□□□□□ -2.13
UPK2O00526 AC109486.1-201ENST00000486833 374 ntBASIC1.77□□□□□ -2.13
UPK2O00526 AC139453.3-201ENST00000493276 369 ntBASIC1.77□□□□□ -2.13
UPK2O00526 AC093281.2-201ENST00000510153 597 ntBASIC1.77□□□□□ -2.13
UPK2O00526 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.77□□□□□ -2.13
UPK2O00526 AC118465.1-201ENST00000513820 1271 ntBASIC1.77□□□□□ -2.13
UPK2O00526 RNA5SP281-201ENST00000516504 135 ntBASIC1.77□□□□□ -2.13
UPK2O00526 RNU6-467P-201ENST00000517027 110 ntBASIC1.77□□□□□ -2.13
UPK2O00526 MTND1P36-201ENST00000522384 936 ntBASIC1.77□□□□□ -2.13
UPK2O00526 NACAP3-201ENST00000552100 481 ntBASIC1.77□□□□□ -2.13
UPK2O00526 AL121821.2-201ENST00000556081 394 ntBASIC1.77□□□□□ -2.13
UPK2O00526 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.77□□□□□ -2.13
UPK2O00526 AC091152.3-201ENST00000604227 325 ntBASIC1.77□□□□□ -2.13
UPK2O00526 AL121917.1-203ENST00000605534 577 ntBASIC1.77□□□□□ -2.13
UPK2O00526 AC069294.1-201ENST00000608397 350 ntBASIC1.77□□□□□ -2.13
UPK2O00526 AC025034.2-201ENST00000623264 286 ntBASIC1.77□□□□□ -2.13
UPK2O00526 AL138960.2-201ENST00000625145 535 ntBASIC1.77□□□□□ -2.13
UPK2O00526 MIR7157-201ENST00000635801 60 ntBASIC1.77□□□□□ -2.13
UPK2O00526 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
UPK2O00526 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
UPK2O00526 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
UPK2O00526 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
UPK2O00526 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.76□□□□□ -2.13
UPK2O00526 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms