Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 CASC19-280ENST00000642102 1351 ntBASIC3.83□□□□□ -1.8
FOXN3O00409 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
FOXN3O00409 MTND5P17-201ENST00000418405 1603 ntBASIC3.83□□□□□ -1.8
FOXN3O00409 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
FOXN3O00409 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
FOXN3O00409 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
FOXN3O00409 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
FOXN3O00409 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
FOXN3O00409 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
FOXN3O00409 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
FOXN3O00409 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.82□□□□□ -1.8
FOXN3O00409 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.82□□□□□ -1.8
FOXN3O00409 SNORD9-201ENST00000362566 104 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 Y_RNA.295-201ENST00000364918 102 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 SNORD115-7-201ENST00000365306 82 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 RNU6-741P-201ENST00000383889 107 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 SNORA69-201ENST00000383895 132 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 SNORA57.1-201ENST00000391227 145 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
FOXN3O00409 AL136116.1-201ENST00000403591 381 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 RPL30P2-201ENST00000414021 291 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 DBIP2-201ENST00000419076 262 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.82□□□□□ -1.8
FOXN3O00409 ZNF863P-201ENST00000426746 417 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 AL512844.2-201ENST00000433990 593 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.82□□□□□ -1.8
FOXN3O00409 NOTCH2P1-201ENST00000443481 624 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 MTND5P20-201ENST00000448677 143 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.82□□□□□ -1.8
FOXN3O00409 RPS20P22-201ENST00000473700 357 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 RNA5SP401-201ENST00000515920 127 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 SNORA70.18-201ENST00000516696 98 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 AC026333.2-201ENST00000542164 106 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.82□□□□□ -1.8
FOXN3O00409 AC074050.1-201ENST00000563247 211 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 MIR4775-201ENST00000581168 75 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.82□□□□□ -1.8
FOXN3O00409 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.82□□□□□ -1.8
FOXN3O00409 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.82□□□□□ -1.8
FOXN3O00409 AC008962.1-201ENST00000605729 304 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 AC009994.1-201ENST00000606889 253 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
FOXN3O00409 AC034102.8-201ENST00000615146 484 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 AC011155.2-201ENST00000623202 216 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 MTND5P42-201ENST00000637720 498 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
FOXN3O00409 AL137003.2-201ENST00000606924 2538 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.82□□□□□ -1.8
FOXN3O00409 AC007785.2-201ENST00000598627 1916 ntBASIC3.82□□□□□ -1.8
FOXN3O00409 MTND4P29-201ENST00000503122 1372 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.81□□□□□ -1.8
FOXN3O00409 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXN3O00409 Y_RNA.38-201ENST00000362617 102 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 RNU6-797P-201ENST00000363101 109 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 Y_RNA.245-201ENST00000364493 95 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 RNU6-534P-201ENST00000364877 106 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 RNU6-817P-201ENST00000391083 104 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 AL139039.1-201ENST00000401900 692 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 AL590704.1-201ENST00000402856 794 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 AC138393.2-201ENST00000414742 246 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 AL035423.1-201ENST00000420331 213 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.81□□□□□ -1.8
FOXN3O00409 ATP5JP1-201ENST00000431631 322 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 HIGD1AP11-201ENST00000438361 280 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.81□□□□□ -1.8
FOXN3O00409 AC016691.1-201ENST00000441321 413 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.81□□□□□ -1.8
FOXN3O00409 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.81□□□□□ -1.8
FOXN3O00409 CACYBPP2-201ENST00000453625 678 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 AL160314.1-201ENST00000490836 438 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 AC008628.2-201ENST00000502605 298 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 AC092436.1-201ENST00000506450 503 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 AC025465.4-201ENST00000513422 638 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 SNORA31.3-201ENST00000516029 96 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 AC109635.3-201ENST00000529536 185 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.81□□□□□ -1.8
FOXN3O00409 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.81□□□□□ -1.8
FOXN3O00409 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.81□□□□□ -1.8
FOXN3O00409 AC099778.2-201ENST00000610904 211 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 AL121772.2-201ENST00000614331 297 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 AL359547.2-201ENST00000615810 418 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 DUXAP9-208ENST00000622815 614 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 AC009033.1-201ENST00000624279 431 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 AL512643.1-201ENST00000635735 524 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 MIR1321-201ENST00000637766 79 ntBASIC3.81□□□□□ -1.8
FOXN3O00409 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
FOXN3O00409 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXN3O00409 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.81□□□□□ -1.8
FOXN3O00409 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FOXN3O00409 AL354685.2-201ENST00000448218 1447 ntBASIC3.8□□□□□ -1.8
FOXN3O00409 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
FOXN3O00409 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.8□□□□□ -1.8
FOXN3O00409 RPS4XP5-202ENST00000449995 1334 ntBASIC3.8□□□□□ -1.8
FOXN3O00409 NACAP2-201ENST00000318548 624 ntBASIC3.8□□□□□ -1.8
FOXN3O00409 Y_RNA.89-201ENST00000363031 102 ntBASIC3.8□□□□□ -1.8
FOXN3O00409 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXN3O00409 RN7SKP27-201ENST00000410684 333 ntBASIC3.8□□□□□ -1.8
FOXN3O00409 RN7SKP53-201ENST00000411337 315 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms