Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MIR3200-201ENST00000580767 85 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC188H7C350 MIR5195-201ENST00000583555 115 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 AC005498.1-201ENST00000592125 465 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 RPL23AP78-201ENST00000599928 470 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 AC121247.2-201ENST00000604776 136 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC188H7C350 AC138749.5-201ENST00000611461 208 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC188H7C350 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC188H7C350 AC116165.2-201ENST00000616705 206 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 AC108479.2-201ENST00000617314 601 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 AC008147.4-201ENST00000617570 1204 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 UCA1.1-201ENST00000620952 75 ntBASIC2.97□□□□□ -1.93
CCDC188H7C350 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC188H7C350 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC188H7C350 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC188H7C350 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.93
CCDC188H7C350 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.93
CCDC188H7C350 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CCDC188H7C350 GNG5P1-201ENST00000255500 204 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 Y_RNA.111-201ENST00000363248 100 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 SNORA71.1-201ENST00000364523 117 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 RNY4P34-201ENST00000364779 95 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 RNY3P10-201ENST00000384764 102 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC188H7C350 AL512633.1-201ENST00000399931 655 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC188H7C350 AL031121.1-201ENST00000406553 254 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 RNU6-193P-201ENST00000410977 107 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC188H7C350 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 NPM1P11-201ENST00000417106 855 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 ZNF90P2-204ENST00000419323 1075 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 AL645937.1-202ENST00000421799 937 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 AL139281.1-201ENST00000422120 335 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 AC007283.2-201ENST00000424739 197 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 AL589872.1-201ENST00000426602 288 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC188H7C350 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC188H7C350 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC188H7C350 AC005300.1-201ENST00000428401 373 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 RPL36AP6-201ENST00000435770 321 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC188H7C350 FABP5P13-201ENST00000452144 328 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC188H7C350 AC003982.1-202ENST00000469928 248 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 MTND1P3-201ENST00000484956 952 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 RPL36AP51-201ENST00000487216 318 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 RPS29P20-201ENST00000489592 171 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC188H7C350 RNU6-826P-201ENST00000516827 104 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 RNU6-677P-201ENST00000516914 101 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 RNU6-1092P-201ENST00000516955 87 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC188H7C350 AP003467.2-201ENST00000520175 319 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC188H7C350 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC188H7C350 HMGN1P30-201ENST00000589286 268 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 AC008739.2-201ENST00000597006 317 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 AL590229.1-201ENST00000603497 542 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 AL035413.2-201ENST00000604801 525 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 AC068276.1-201ENST00000605793 379 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC188H7C350 AC092140.2-201ENST00000618027 521 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 MIR7975-201ENST00000619350 68 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CCDC188H7C350 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC188H7C350 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 AC096644.4-201ENST00000563417 2912 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC188H7C350 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.96□□□□□ -1.94
CCDC188H7C350 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC188H7C350 AC092593.1-201ENST00000515413 1815 ntBASIC2.96□□□□□ -1.94
CCDC188H7C350 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC188H7C350 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC188H7C350 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CCDC188H7C350 AC010680.1-201ENST00000590024 3590 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.95□□□□□ -1.94
CCDC188H7C350 AC099654.7-201ENST00000635788 2127 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 SNORD21-201ENST00000383953 95 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 RNU6-190P-201ENST00000384154 102 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 RNVU1-14-201ENST00000384770 164 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 RNU6-817P-201ENST00000391083 104 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 NDUFB4P4-201ENST00000404822 243 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 RPL5P18-201ENST00000406671 891 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC188H7C350 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC188H7C350 CYCSP46-201ENST00000423569 204 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC188H7C350 AL714022.1-201ENST00000439897 151 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 RPL23AP58-201ENST00000440453 469 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC188H7C350 AC093899.1-201ENST00000457984 376 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 AL358832.1-201ENST00000497800 389 ntBASIC2.95□□□□□ -1.94
CCDC188H7C350 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC188H7C350 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC188H7C350 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC188H7C350 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms