Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RPL37P10-201ENST00000412884 288 ntBASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 FABP5P15-201ENST00000453566 214 ntBASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 Y_RNA.635-201ENST00000459041 101 ntBASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 AC025755.1-201ENST00000521306 278 ntBASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 COPS8P3-201ENST00000526024 482 ntBASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 MTCO3P23-201ENST00000561363 289 ntBASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 POLR3GP2-201ENST00000588366 668 ntBASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 AL133255.1-201ENST00000606374 441 ntBASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 AL359757.2-201ENST00000624309 274 ntBASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 RNU6-562P-201ENST00000362731 107 ntBASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 RNA5SP307-201ENST00000362863 116 ntBASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 SNORD46.1-201ENST00000364139 104 ntBASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 RNU6-328P-201ENST00000390887 106 ntBASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 AL591034.1-201ENST00000407447 340 ntBASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 RNU2-68P-201ENST00000410878 191 ntBASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 RPL21P91-201ENST00000429231 479 ntBASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 RPL23AP69-201ENST00000431134 458 ntBASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 AL512844.2-201ENST00000433990 593 ntBASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 HMGB1P30-201ENST00000492455 606 ntBASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 AC008526.1-201ENST00000509149 338 ntBASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 Y_RNA.701-201ENST00000516812 110 ntBASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 AC087854.1-201ENST00000519706 414 ntBASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 AP003122.3-201ENST00000526316 255 ntBASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 AP005639.2-201ENST00000527592 928 ntBASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 AC084851.1-201ENST00000529105 249 ntBASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 TRAV37-201ENST00000553906 342 ntBASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 AL354984.3-201ENST00000604803 325 ntBASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 RNU6-85P-201ENST00000605989 107 ntBASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 AL355365.1-201ENST00000616480 294 ntBASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 MTND4LP32-201ENST00000636111 270 ntBASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC163A0A0D9SF12 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 AP001486.2-201ENST00000561652 5113 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 MIR208A-201ENST00000362287 71 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 RNU4-76P-201ENST00000364509 141 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 Y_RNA.259-201ENST00000364619 101 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 RNU6-214P-201ENST00000384130 107 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 RNU6-140P-201ENST00000384566 108 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 MIR548K-201ENST00000408406 116 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 RNU4-14P-201ENST00000410858 122 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 RPS20P14-201ENST00000412545 360 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 AC007560.1-201ENST00000426912 237 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 HMGB1P9-201ENST00000429856 646 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 NDUFB4P6-201ENST00000436819 366 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 RPS29P7-201ENST00000439662 171 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 Z82210.1-201ENST00000440037 231 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 AL356535.1-201ENST00000440335 398 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 RPL32P28-201ENST00000443577 397 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 AC069113.1-201ENST00000517763 267 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 CASP1P1-201ENST00000526345 212 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 MIR5685-201ENST00000579080 79 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 AC023043.2-201ENST00000589678 1026 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 AL138726.1-201ENST00000614873 333 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 AC084781.2-201ENST00000615568 161 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 ATP5A1P2-202ENST00000616464 443 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 AC091905.2-201ENST00000623143 306 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms