Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 OSBPL9P5-201ENST00000542581 171 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 AC002400.1-201ENST00000569310 726 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 SNORD84-203ENST00000584275 78 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 TPMTP1-201ENST00000592307 737 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 HSPE1P7-201ENST00000604681 321 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 AP000254.1-201ENST00000609934 520 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 TUG1_2.1-201ENST00000614234 87 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 AC068057.2-201ENST00000624047 895 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 AC093591.3-201ENST00000634516 308 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 AC006927.3-201ENST00000638789 384 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 AC116096.1-201ENST00000566804 2314 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 RNU5A-1-201ENST00000362698 116 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 RNU4-21P-201ENST00000362802 126 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 RNA5SP456-201ENST00000364002 114 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 RNU6-501P-201ENST00000364072 100 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 RNU6-270P-201ENST00000364131 105 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 RNU1-91P-201ENST00000364746 163 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 RNY4P16-201ENST00000364768 94 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 RNU6-533P-201ENST00000384144 107 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 RNA5SP252-201ENST00000391131 119 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 SNORA26.8-201ENST00000391306 124 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 SAR1AP2-201ENST00000392696 594 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 RPS27AP14-201ENST00000422868 454 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 AC093106.2-201ENST00000428212 385 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 NDUFB4P6-201ENST00000436819 366 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 RPL17P49-201ENST00000443728 411 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 COX6CP12-201ENST00000446748 202 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 AL513124.1-201ENST00000450410 614 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 AL049714.1-201ENST00000466686 347 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 AC010631.1-201ENST00000474150 156 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 RPL30P6-201ENST00000475925 342 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 RNU6-64P-201ENST00000517119 105 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 AC025881.1-201ENST00000518851 512 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 AP000907.2-201ENST00000530827 353 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 MIR4293-201ENST00000584305 78 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 AC012065.4-201ENST00000602445 679 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 AP001981.2-201ENST00000603241 418 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 AC025811.1-201ENST00000604312 472 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 AC103810.6-201ENST00000606708 136 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 AC239868.4-201ENST00000608318 671 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 AC009570.1-201ENST00000609599 745 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 MIR7844-201ENST00000616161 122 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 AC068831.7-201ENST00000616954 363 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 MIR6130-201ENST00000619419 109 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 AC091931.1-201ENST00000623488 728 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 AL138713.1-201ENST00000624026 2130 ntBASIC1.97□□□□□ -2.09
TRAV40A0A0B4J280 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 DEFB108F-201ENST00000344638 222 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 MIR6073-201ENST00000352083 89 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 RNU6-432P-201ENST00000384196 109 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 MT-TH-201ENST00000387441 69 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 RNU6-754P-201ENST00000391166 107 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 RPL21P75-201ENST00000396599 483 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 RPL21P28-201ENST00000401418 483 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AL592114.1-201ENST00000403842 483 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 SNORA3.2-201ENST00000408221 125 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 MIR1261-201ENST00000408659 82 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 RNA5SP38-201ENST00000410750 119 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 CYCSP46-201ENST00000423569 204 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 MTND4P20-201ENST00000424125 869 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AC233728.2-201ENST00000425348 757 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AL356583.2-201ENST00000426536 280 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AC008850.1-201ENST00000427546 362 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 RPS6P15-201ENST00000431996 751 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AC010153.1-201ENST00000432862 727 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 UBE2V1P13-201ENST00000436983 439 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AL590365.1-201ENST00000450788 243 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms