Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 AC096638.1-201ENST00000444678 216 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 RPL39P6-201ENST00000448289 150 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 RPL12P25-201ENST00000455592 494 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 RPL26P9-201ENST00000457466 433 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 RPS15AP17-201ENST00000470598 390 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 RNU6-1261P-201ENST00000517194 104 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 RNU2-19P-201ENST00000517288 84 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 RANP3-201ENST00000530970 276 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 AL133241.1-201ENST00000556832 487 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 MIR4789-201ENST00000577469 82 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 MIR3945-201ENST00000581853 98 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 MIR4637-201ENST00000582405 84 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 MIR3199-1-201ENST00000582434 88 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 AL035411.2-201ENST00000604022 421 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 AC005034.5-201ENST00000604219 466 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 AC010975.3-201ENST00000618727 978 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 AC008443.7-201ENST00000622195 246 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 AC087821.2-201ENST00000637086 450 ntBASIC1.34□□□□□ -2.19
TRAV1-1A0A0B4J248 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.34□□□□□ -2.2
TRAV1-1A0A0B4J248 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 SNRPEP3-201ENST00000338402 276 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 MIR16-2-201ENST00000362117 81 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 U8.3-201ENST00000363321 132 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 RNU6-1300P-201ENST00000391046 108 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 AL512604.1-201ENST00000404812 257 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 SNORA3.2-201ENST00000408221 125 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 U6atac.2-201ENST00000408644 118 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 USP9YP19-201ENST00000412165 485 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 USP9YP13-201ENST00000417797 480 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 AIMP1P2-201ENST00000425294 312 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 AC093106.2-201ENST00000428212 385 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 MED14P1-201ENST00000430517 648 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 FAM103A2P-201ENST00000444122 354 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 MRPL42P4-201ENST00000453267 443 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 OFD1P3Y-201ENST00000453312 783 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 SNORD121B-201ENST00000458838 81 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 TRBV1-201ENST00000476502 284 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 AC020699.1-201ENST00000505161 445 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 YWHAEP4-201ENST00000505390 198 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 AC096745.1-201ENST00000509945 370 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 AC008549.1-201ENST00000512900 643 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 AC093677.1-201ENST00000514414 678 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 SNORA48.9-201ENST00000516419 162 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 AC007151.1-201ENST00000572774 483 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 MTATP6P25-201ENST00000574491 261 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 AC005951.2-201ENST00000576282 495 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 UBE2L4-201ENST00000587688 464 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 AC068790.3-201ENST00000602988 553 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 AC068944.2-201ENST00000610373 403 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 uc_338.5-201ENST00000611839 155 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 AC010678.1-201ENST00000614118 713 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 AC024581.2-201ENST00000619986 252 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 AC025048.6-202ENST00000627667 438 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 U2.21-201ENST00000637295 81 ntBASIC1.33□□□□□ -2.2
TRAV1-1A0A0B4J248 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AC005539.1-201ENST00000443768 1479 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 RNU6-216P-201ENST00000363282 104 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 SNORA64-201ENST00000384674 134 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 MIR147B-201ENST00000390185 80 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AC019129.1-201ENST00000403786 261 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 PTGES3P2-201ENST00000407942 482 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 EIF4EP4-201ENST00000424916 578 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 ZYG11AP1-201ENST00000430329 837 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 GTF2IP7-202ENST00000436677 309 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AC092393.1-201ENST00000439625 742 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AC093155.1-201ENST00000440164 826 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AL360221.1-201ENST00000445989 335 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 SEPT14P24-201ENST00000447236 180 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 MTCO1P42-201ENST00000457379 726 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 RPS27AP10-201ENST00000496103 208 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AC092436.1-201ENST00000506450 503 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AC008526.1-201ENST00000509149 338 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AC121161.1-201ENST00000510606 652 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 MIR892C-201ENST00000516410 77 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms