| BACE2 | Q9Y5Z0 | LINC00644-201 | ENST00000555156 | 295 nt | TSL 2 BASIC | 4.45 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | SNORD84-203 | ENST00000584275 | 78 nt | BASIC | 4.45 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | BNIP3P16-201 | ENST00000589779 | 534 nt | BASIC | 4.45 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | LINC02112-205 | ENST00000606744 | 236 nt | TSL 1 (best) BASIC | 4.45 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | SNORD91B-202 | ENST00000608459 | 222 nt | BASIC | 4.45 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC007485.1-201 | ENST00000616755 | 206 nt | BASIC | 4.45 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | MIR7151-201 | ENST00000617477 | 60 nt | BASIC | 4.45 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC005086.4-201 | ENST00000623065 | 213 nt | BASIC | 4.45 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC034229.5-201 | ENST00000624258 | 185 nt | BASIC | 4.45 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | ORMDL1-201 | ENST00000325795 | 2692 nt | APPRIS P1 TSL 1 (best) BASIC | 4.45 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | GABPB1-AS1-202 | ENST00000499624 | 16182 nt | TSL 1 (best) BASIC | 4.45 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | MYOZ2-201 | ENST00000307128 | 2597 nt | APPRIS P1 TSL 1 (best) BASIC | 4.45 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | CCDC102B-201 | ENST00000360242 | 2711 nt | APPRIS P1 TSL 1 (best) BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AGTR1-202 | ENST00000402260 | 2172 nt | TSL 5 BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC139713.2-215 | ENST00000641428 | 5037 nt | BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | PJA2-202 | ENST00000361557 | 4645 nt | APPRIS P1 TSL 2 BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | F2RL2-201 | ENST00000296641 | 3429 nt | APPRIS P1 TSL 1 (best) BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | ZBBX-202 | ENST00000392764 | 2849 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | TMEM71-202 | ENST00000377901 | 1861 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | RNU6-371P-201 | ENST00000364283 | 108 nt | BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | U3.15-201 | ENST00000365398 | 212 nt | BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | RNU6ATAC34P-201 | ENST00000408879 | 121 nt | BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | SRGAP3-AS1-201 | ENST00000414633 | 428 nt | TSL 2 BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | RPL21P90-201 | ENST00000415692 | 466 nt | BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | LINC01344-201 | ENST00000420760 | 261 nt | TSL 3 BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | MTCYBP10-201 | ENST00000424905 | 650 nt | BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC079780.1-201 | ENST00000428259 | 207 nt | BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | UBE2E2-AS1-202 | ENST00000430018 | 499 nt | TSL 2 BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC078993.1-203 | ENST00000435789 | 1037 nt | TSL 5 BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | EHHADH-202 | ENST00000440662 | 656 nt | TSL 3 BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | ABCF2P2-201 | ENST00000450549 | 296 nt | BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC084198.1-201 | ENST00000477747 | 402 nt | BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | VN1R104P-201 | ENST00000505115 | 1009 nt | BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC112196.1-201 | ENST00000515092 | 832 nt | TSL 3 BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | SDHAF2-203 | ENST00000534878 | 523 nt | TSL 2 BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | LINC02326-201 | ENST00000552028 | 540 nt | TSL 3 BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AL117187.1-201 | ENST00000555482 | 181 nt | BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC034105.4-201 | ENST00000568304 | 277 nt | BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC022655.2-201 | ENST00000577280 | 318 nt | BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | MIR5692A1-201 | ENST00000580523 | 69 nt | BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC073539.2-201 | ENST00000597113 | 165 nt | BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | LINC00901.1-201 | ENST00000617252 | 152 nt | BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | TMEM212-205 | ENST00000619900 | 585 nt | APPRIS P1 TSL 3 BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AL732372.2-225 | ENST00000642124 | 456 nt | BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | CNGB3-201 | ENST00000320005 | 4347 nt | APPRIS P1 TSL 1 (best) BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | ZNF85-201 | ENST00000300540 | 1531 nt | TSL 1 (best) BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | DSG2-AS1-202 | ENST00000583706 | 2024 nt | TSL 5 BASIC | 4.44 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | ZNF807-201 | ENST00000328088 | 1707 nt | BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | KIF23-206 | ENST00000558585 | 2296 nt | TSL 2 BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | SLC38A9-223 | ENST00000515629 | 2673 nt | TSL 2 BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | PLCB4-203 | ENST00000378493 | 5796 nt | APPRIS ALT1 TSL 2 BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | FMN2-207 | ENST00000545751 | 1913 nt | TSL 5 BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | NCOA1-201 | ENST00000288599 | 6952 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC138393.1-203 | ENST00000327086 | 343 nt | BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC004057.1-202 | ENST00000356247 | 284 nt | TSL 3 BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.252-201 | ENST00000364556 | 101 nt | BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.364-201 | ENST00000365532 | 101 nt | BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.480-201 | ENST00000384364 | 102 nt | BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | RNU6-985P-201 | ENST00000410182 | 104 nt | BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | RN7SKP167-201 | ENST00000411047 | 285 nt | BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC079163.1-201 | ENST00000418416 | 407 nt | TSL 2 BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AL445488.1-202 | ENST00000430623 | 545 nt | TSL 3 BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC090617.2-201 | ENST00000433167 | 404 nt | TSL 3 BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AL023693.1-201 | ENST00000434255 | 216 nt | TSL 5 BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | SNRPEP4-201 | ENST00000435815 | 279 nt | BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | BTF3P15-201 | ENST00000455606 | 336 nt | BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AF213884.1-201 | ENST00000488102 | 463 nt | BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC092994.1-201 | ENST00000498604 | 279 nt | TSL 3 BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC020593.1-201 | ENST00000507399 | 299 nt | BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC027801.4-201 | ENST00000518420 | 395 nt | TSL 5 BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AP003122.3-201 | ENST00000526316 | 255 nt | BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | HTN3-202 | ENST00000526767 | 578 nt | APPRIS P2 TSL 1 (best) BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | TMCO5B-203 | ENST00000529623 | 509 nt | TSL 4 BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC010653.1-201 | ENST00000571108 | 881 nt | BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC053481.4-201 | ENST00000583164 | 216 nt | BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC006130.2-201 | ENST00000586202 | 326 nt | BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC003973.1-201 | ENST00000600071 | 546 nt | TSL 4 BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC005014.2-201 | ENST00000607795 | 599 nt | BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AL161423.1-201 | ENST00000613700 | 262 nt | BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | MIR6875-201 | ENST00000617506 | 72 nt | BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC013727.1-201 | ENST00000618581 | 839 nt | TSL 5 BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | IFI44L-201 | ENST00000370751 | 5874 nt | APPRIS P1 TSL 1 (best) BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | NEAT1-202 | ENST00000501122 | 22743 nt | BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AKAP11-201 | ENST00000025301 | 9920 nt | APPRIS P1 TSL 1 (best) BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | RNF128-202 | ENST00000324342 | 2654 nt | TSL 1 (best) BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | MAP3K19-203 | ENST00000375845 | 4369 nt | APPRIS P3 TSL 1 (best) BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AGBL2-201 | ENST00000357610 | 3295 nt | APPRIS ALT2 TSL 5 BASIC | 4.43 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | ZNF705A-201 | ENST00000359286 | 3455 nt | APPRIS P1 TSL 2 BASIC | 4.42 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | FAR2-203 | ENST00000547116 | 1787 nt | TSL 2 BASIC | 4.42 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | ZNF285B-201 | ENST00000561698 | 1767 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | UBE2W-207 | ENST00000602593 | 2201 nt | APPRIS P1 TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | PTPN22-201 | ENST00000359785 | 3654 nt | APPRIS P2 TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | GMNC-201 | ENST00000442080 | 3422 nt | APPRIS P1 TSL 5 BASIC | 4.42 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | OR10D3-202 | ENST00000641351 | 3561 nt | APPRIS P1 BASIC | 4.42 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | ANKRD36C-201 | ENST00000295246 | 2272 nt | TSL 5 BASIC | 4.42 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | AC010132.3-201 | ENST00000442788 | 2430 nt | APPRIS P5 TSL 5 BASIC | 4.42 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | LINC02232-201 | ENST00000509932 | 4079 nt | TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | RAD17-203 | ENST00000345306 | 2789 nt | TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | CPXCR1-202 | ENST00000373111 | 1577 nt | APPRIS P1 TSL 2 BASIC | 4.42 | □□□□□ -1.7 | | |
| BACE2 | Q9Y5Z0 | RNU6-293P-201 | ENST00000411259 | 106 nt | BASIC | 4.42 | □□□□□ -1.7 | | |