Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX11Q9Y5W9 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.53□□□□□ -1.68
SNX11Q9Y5W9 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SNX11Q9Y5W9 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNX11Q9Y5W9 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNX11Q9Y5W9 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SNX11Q9Y5W9 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNX11Q9Y5W9 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.53□□□□□ -1.69
SNX11Q9Y5W9 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 AC097461.1-201ENST00000568928 2821 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 Y_RNA.84-201ENST00000363011 104 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 RNA5SP28-201ENST00000363841 119 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 Y_RNA.237-201ENST00000364439 102 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 SAR1AP2-201ENST00000392696 594 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 AL592291.1-201ENST00000403830 352 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 U3.35-201ENST00000408405 208 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 RNU4-78P-201ENST00000410940 126 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 RNU6-130P-201ENST00000411112 103 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 AC011998.1-201ENST00000433403 117 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 AL121871.1-201ENST00000443413 436 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 NDUFB1P2-201ENST00000449477 176 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 AC108751.2-201ENST00000469993 231 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 RN7SL810P-201ENST00000493031 276 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 OR4H12P-201ENST00000556269 907 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 AC233702.9-201ENST00000581528 203 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 VN1R85P-201ENST00000601587 426 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 AL158827.2-201ENST00000602494 330 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 AL355812.1-201ENST00000603215 216 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 AC005344.1-201ENST00000613391 459 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 AP001282.2-201ENST00000616149 309 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 AL445567.2-201ENST00000618935 498 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 AL691447.3-201ENST00000635020 330 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 ZNF285B-201ENST00000561698 1767 ntBASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SNX11Q9Y5W9 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 AL049555.1-201ENST00000562834 1933 ntBASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 Y_RNA.183-201ENST00000363882 113 ntBASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 RNU6-746P-201ENST00000384112 109 ntBASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 RNU6-933P-201ENST00000384424 107 ntBASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 SNORA37-201ENST00000384504 129 ntBASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 RNU6-1203P-201ENST00000410703 110 ntBASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 RNU2-71P-201ENST00000411395 189 ntBASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 AP000275.1-201ENST00000411943 390 ntBASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 SSXP9-201ENST00000417503 292 ntBASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 AC004938.1-201ENST00000438468 308 ntBASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 GEMIN8P3-201ENST00000445417 720 ntBASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 TDGF1P1-201ENST00000445734 527 ntBASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 AL360271.2-201ENST00000447710 161 ntBASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 RPS11P1-201ENST00000451072 473 ntBASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 AC008958.1-201ENST00000511047 682 ntBASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 AC109329.1-201ENST00000518744 317 ntBASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 MIR3133-201ENST00000583157 78 ntBASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 IPO5P1-202ENST00000600039 287 ntBASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 ZYXP1-201ENST00000617638 118 ntBASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 FP236240.3-201ENST00000623061 327 ntBASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 AC107068.1-201ENST00000563286 4218 ntBASIC4.51□□□□□ -1.69
SNX11Q9Y5W9 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNX11Q9Y5W9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
SNX11Q9Y5W9 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNX11Q9Y5W9 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SNX11Q9Y5W9 AL022322.2-201ENST00000624072 20397 ntBASIC4.5□□□□□ -1.69
SNX11Q9Y5W9 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.5□□□□□ -1.69
SNX11Q9Y5W9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
SNX11Q9Y5W9 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNX11Q9Y5W9 AL391987.6-201ENST00000305671 199 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms