Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
YIPF1Q9Y548 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.19□□□□□ -1.9
YIPF1Q9Y548 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 RNU6-50P-201ENST00000362356 103 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 RNU6-181P-201ENST00000363225 107 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 DEFB109C-201ENST00000382575 264 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 DEFB109B-201ENST00000382656 264 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 RNU6-192P-201ENST00000391253 100 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 AL359634.1-202ENST00000404721 284 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 GSTA9P-201ENST00000406231 611 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 MIR1289-1-201ENST00000408836 144 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 USP12PX-201ENST00000432383 1057 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 FCF1P1-201ENST00000432690 571 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 TXNP1-201ENST00000441872 371 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 MTATP6P30-201ENST00000443540 664 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 SNRPGP6-201ENST00000451124 220 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 AC107401.1-201ENST00000503426 685 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 RNU2-10P-201ENST00000516375 211 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 SNORA70.16-201ENST00000516390 95 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 RNU6-445P-201ENST00000516949 107 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 AC100870.1-201ENST00000522035 505 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 MTCYBP20-201ENST00000524239 1129 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 AC011979.2-201ENST00000527568 352 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 EIF1P4-201ENST00000572664 335 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 AL022154.1-201ENST00000604698 785 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 AP002826.1-201ENST00000608835 315 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 RMST_8.1-201ENST00000610287 165 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 AL591516.1-201ENST00000611326 274 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 AL359740.1-201ENST00000624340 592 ntBASIC3.18□□□□□ -1.9
YIPF1Q9Y548 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
YIPF1Q9Y548 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
YIPF1Q9Y548 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
YIPF1Q9Y548 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
YIPF1Q9Y548 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
YIPF1Q9Y548 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
YIPF1Q9Y548 Y_RNA.296-201ENST00000364930 108 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 RNU6-1215P-201ENST00000384441 102 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 MIR184-201ENST00000384962 84 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.17□□□□□ -1.9
YIPF1Q9Y548 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.17□□□□□ -1.9
YIPF1Q9Y548 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.17□□□□□ -1.9
YIPF1Q9Y548 AC133104.1-201ENST00000429100 218 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 AC236972.1-201ENST00000433225 199 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 NEK4P1-201ENST00000433383 879 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 AL451074.3-201ENST00000437709 472 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 DNAJC19P4-201ENST00000440115 345 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.17□□□□□ -1.9
YIPF1Q9Y548 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.17□□□□□ -1.9
YIPF1Q9Y548 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.17□□□□□ -1.9
YIPF1Q9Y548 UBE2DNL-203ENST00000474922 222 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 RPL31P60-201ENST00000478450 367 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.17□□□□□ -1.9
YIPF1Q9Y548 RNU1-143P-201ENST00000516296 146 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 SCARNA24.1-201ENST00000516465 137 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 RNA5SP468-201ENST00000516782 93 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
YIPF1Q9Y548 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.17□□□□□ -1.9
YIPF1Q9Y548 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
YIPF1Q9Y548 AC093012.1-202ENST00000549403 582 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.17□□□□□ -1.9
YIPF1Q9Y548 AC010546.1-201ENST00000569391 485 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.17□□□□□ -1.9
YIPF1Q9Y548 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.17□□□□□ -1.9
YIPF1Q9Y548 GLUD1P4-201ENST00000590914 418 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 AL021997.1-201ENST00000605757 193 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 AC004492.1-201ENST00000607036 742 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 U1.23-201ENST00000610293 146 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 SDR42E1P2-201ENST00000614861 481 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 RNU1-68P-201ENST00000615382 146 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 U1.39-201ENST00000621562 146 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.17□□□□□ -1.9
YIPF1Q9Y548 OR4G2P-202ENST00000641004 1759 ntBASIC3.17□□□□□ -1.9
YIPF1Q9Y548 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
YIPF1Q9Y548 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
YIPF1Q9Y548 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
YIPF1Q9Y548 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 391 ms