Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC006539.2-201ENST00000601729 572 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 AP000403.1-201ENST00000603349 851 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 AL356280.1-201ENST00000603614 379 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 AP000811.1-201ENST00000603803 651 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 AL355598.1-201ENST00000604169 202 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 AP000240.1-201ENST00000609910 452 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 AC090970.3-201ENST00000612566 866 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 AL050303.3-201ENST00000613704 284 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 AL391262.2-201ENST00000622466 494 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.21□□□□□ -2.05
KCNIP3Q9Y2W7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 RNU6-512P-201ENST00000364438 103 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 RNU6-14P-201ENST00000384630 106 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 TAS2R15P-201ENST00000390674 928 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 RNA5SP210-201ENST00000391034 120 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 MIR1193-201ENST00000408109 78 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 RNU6-1328P-201ENST00000410938 106 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 AC005326.1-201ENST00000429197 123 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 RPL36AP53-201ENST00000432891 316 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 AL354941.1-201ENST00000438600 464 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 H2AFZP6-201ENST00000444403 394 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 AC233279.1-201ENST00000455300 423 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 MTCO1P42-201ENST00000457379 726 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 TRBV1-201ENST00000476502 284 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 RNU6-703P-201ENST00000516946 107 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 SNORA31.18-201ENST00000517043 134 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 AC023632.4-201ENST00000517783 191 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 AP001372.4-201ENST00000524889 472 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 AC106785.1-201ENST00000565935 262 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 MIR4635-201ENST00000583759 79 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 KC877982.1-201ENST00000602313 470 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 AL391813.1-201ENST00000603098 260 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 AC024153.1-201ENST00000603103 365 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 ELOCP35-201ENST00000604289 336 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 AC007619.2-201ENST00000605743 379 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 AC107214.2-201ENST00000608204 634 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 AC108747.1-201ENST00000609508 535 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 AC068787.1-201ENST00000623908 691 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 AC026422.1-201ENST00000623961 452 ntBASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KCNIP3Q9Y2W7 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 RNU6-1083P-201ENST00000384022 107 ntBASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 U8.14-201ENST00000390843 143 ntBASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 RPS20P2-201ENST00000402520 389 ntBASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 USP9YP27-201ENST00000418455 438 ntBASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 AL512649.1-201ENST00000428997 581 ntBASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 HMGB1P27-201ENST00000431429 603 ntBASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 AC104389.3-201ENST00000445629 235 ntBASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 RPS27P27-201ENST00000498779 255 ntBASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 NDUFB4P2-201ENST00000509515 391 ntBASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 SNORA74D-201ENST00000516404 141 ntBASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 SNORD19.2-201ENST00000516978 73 ntBASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 RNU6-201P-201ENST00000517100 61 ntBASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 AC121758.2-201ENST00000553271 193 ntBASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 AC007151.1-201ENST00000572774 483 ntBASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 ISCA1P3-201ENST00000577104 373 ntBASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 MIR3146-201ENST00000580367 79 ntBASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 AC024619.4-201ENST00000580924 316 ntBASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 AL358072.1-201ENST00000604156 575 ntBASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 MIR6748-201ENST00000610433 71 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms